RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 EIPR1Q53HC9 387 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 SDE2Q6IQ49 451 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 MZT2AQ6P582 158 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 FAM111BQ6SJ93 734 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 ASPGQ86U10 573 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 GATAD2AQ86YP4 633 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 FAM160A2Q8N612 972 aaPredicted RBP13.52□□□□□ -0.25
CDCA3-207ENST00000538862 ZFP41Q8N8Y5 198 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 ATP6V1C2Q8NEY4 427 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 DNAJA4Q8WW22 397 aaPredicted RBP13.52□□□□□ -0.25
CDCA3-207ENST00000538862 FAM131CQ96AQ9 280 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 FRMD6Q96NE9 622 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 SECISBP2Q96T21 854 aaKnown RBP13.52□□□□□ -0.25
CDCA3-207ENST00000538862 GABRG3Q99928 467 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 ATF6BQ99941 703 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 RNF121Q9H920 327 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 COMMD3Q9UBI1 195 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 TNFRSF10DQ9UBN6 386 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 KLF15Q9UIH9 416 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 NTNG1Q9Y2I2 539 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 WDR45Q9Y484 360 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 J3QRE1 110 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 THBS1P07996 1170 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 ZNF888P0CJ79 500 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 GABRG2P18507 467 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 CELP19835 753 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 BCKDHBP21953 392 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 SOX18P35713 384 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 KIR2DL3P43628 341 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 HOXC5Q00444 222 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 EIF2B5Q13144 721 aaKnown RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 CNIH2Q6PI25 160 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 ZNF836Q6ZNA1 936 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 C11orf74Q86VG3 221 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 MARCH9Q86YJ5 346 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 GID4Q8IVV7 300 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 OR2L13Q8N349 312 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 KCT2Q8NC54 265 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 OR4K14Q8NGD5 310 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 NEIL3Q8TAT5 605 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 BRIX1Q8TDN6 353 aaKnown RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 TMEM255BQ8WV15 326 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 SPRYD4Q8WW59 207 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 LCN9Q8WX39 176 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 SLC7A6Q92536 515 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 CDS1Q92903 461 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 SLC22A18Q96BI1 424 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 ZC3HAV1LQ96H79 300 aaKnown RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 FN3KQ9H479 309 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 CD93Q9NPY3 652 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 PTGFRNQ9P2B2 879 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 ADAM30Q9UKF2 790 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 SMIM10L1P0DMW3 83 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 SLC2A2P11168 524 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 CPN2P22792 545 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 TCEA1P23193 301 aaKnown RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 HLA-DMAP28067 261 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 ATP6V1E1P36543 226 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 CAV3P56539 151 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 EEF1A1P68104 462 aaKnown RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 SUZ12Q15022 739 aaKnown RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 QPRTQ15274 297 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 ZNF322Q6U7Q0 402 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 CXXC5Q7LFL8 322 aaKnown RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 RNF113BQ8IZP6 322 aaKnown RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 C19orf18Q8NEA5 215 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 OR4E2Q8NGC2 313 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 OR14C36Q8NHC7 312 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 ENKURQ8TC29 256 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 SMIM10Q96HG1 83 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 OR2M4Q96R27 311 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 SERINC2Q96SA4 455 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 TMED9Q9BVK6 235 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 HDHD5Q9BXW7 423 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 C6orf106Q9H6K1 298 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 HINT3Q9NQE9 182 aaKnown RBP13.51□□□□□ -0.25
CDCA3-207ENST00000538862 KCMF1Q9P0J7 381 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 SLC7A7Q9UM01 511 aa13.51□□□□□ -0.25
CDCA3-207ENST00000538862 DCHS1Q96JQ0 3298 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 CEP192Q8TEP8 1941 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 SMIM30A4D0T7 59 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 CDC42EP2O14613 210 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 PIP5K1CO60331 668 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 HPGDSO60760 199 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 HOXC4P09017 264 aaPredicted RBP13.5□□□□□ -0.25
CDCA3-207ENST00000538862 SLC35G6P0C7Q6 338 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 APEX1P27695 318 aaKnown RBP13.5□□□□□ -0.25
CDCA3-207ENST00000538862 MLLT3P42568 568 aaPredicted RBP13.5□□□□□ -0.25
CDCA3-207ENST00000538862 ZNF136P52737 540 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 MRPS15P82914 257 aaKnown RBP13.5□□□□□ -0.25
CDCA3-207ENST00000538862 TRIQKQ629K1 86 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 MZT2BQ6NZ67 158 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 USP53Q70EK8 1073 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 RANBP3LQ86VV4 465 aaPredicted RBP13.5□□□□□ -0.25
CDCA3-207ENST00000538862 CPOQ8IVL8 374 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 Q8N402 240 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 DUSP18Q8NEJ0 188 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 BBS1Q8NFJ9 593 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms