RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 LRIT2A6NDA9 550 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 VSTM2BA6NLU5 285 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 CLEC3AO75596 197 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 SERPINA7P05543 415 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 CR2P20023 1033 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 SSTR2P30874 369 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 PLGLB1Q02325 96 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 EVX2Q03828 476 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 MZT1Q08AG7 82 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 MGAT3Q09327 533 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 DBPQ10586 325 aaPredicted RBP6.53□□□□□ -1.36
SORT1-209ENST00000538502 EIF2B1Q14232 305 aaKnown RBP6.53□□□□□ -1.36
SORT1-209ENST00000538502 ZNF266Q14584 549 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 AAK1Q2M2I8 961 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 GGTA1PQ4G0N0 100 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 EOGTQ5NDL2 527 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 MRPL10Q7Z7H8 261 aaKnown RBP6.53□□□□□ -1.36
SORT1-209ENST00000538502 CD163Q86VB7 1156 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 NAGSQ8N159 534 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 DTX3Q8N9I9 347 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 OR9A4Q8NGU2 314 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 NANPQ8TBE9 248 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 ZNF578Q96N58 590 aaPredicted RBP6.53□□□□□ -1.36
SORT1-209ENST00000538502 LMF2Q9BU23 707 aaKnown RBP6.53□□□□□ -1.36
SORT1-209ENST00000538502 EXOSC3Q9NQT5 275 aaKnown RBP6.53□□□□□ -1.36
SORT1-209ENST00000538502 PHRF1Q9P1Y6 1649 aaKnown RBP6.53□□□□□ -1.36
SORT1-209ENST00000538502 GHRLQ9UBU3 117 aa6.53□□□□□ -1.36
SORT1-209ENST00000538502 C11orf98E9PRG8 122 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 BHLHE40O14503 412 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 TSPAN6O43657 245 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 ZNF623O75123 536 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 B3GALNT1O75752 331 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 CPNE6O95741 557 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 SERPINA5P05154 406 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 F7P08709 466 aaPredicted RBP6.52□□□□□ -1.37
SORT1-209ENST00000538502 TGM4P49221 684 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 SP3Q02447 781 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 DLX2Q07687 328 aaPredicted RBP6.52□□□□□ -1.37
SORT1-209ENST00000538502 MSMO1Q15800 293 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 MPEG1Q2M385 716 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 KIAA0907Q7Z7F0 614 aaPredicted RBP6.52□□□□□ -1.37
SORT1-209ENST00000538502 FAM217AQ8IXS0 508 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 KDM8Q8N371 416 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 OR10R2Q8NGX6 335 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 TMEM239Q8WW34 195 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 HRASLS5Q96KN8 279 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 WDR77Q9BQA1 342 aaPredicted RBP6.52□□□□□ -1.37
SORT1-209ENST00000538502 SLC25A21Q9BQT8 299 aaPredicted RBP6.52□□□□□ -1.37
SORT1-209ENST00000538502 NICN1Q9BSH3 213 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 NRIP3Q9NQ35 241 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 SLC2A4RGQ9NR83 387 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 KCNIP2Q9NS61 270 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 SDHAF2Q9NX18 166 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 SLC7A7Q9UM01 511 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 MOKQ9UQ07 419 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 TRDV1A0A1B0GX56 115 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 TMEM212A6NML5 194 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 NRP1O14786 923 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 TCRBP04435 133 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 PRKAR1BP31321 381 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 RFX2P48378 723 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 RANP62826 216 aaKnown RBP6.52□□□□□ -1.37
SORT1-209ENST00000538502 SGCAQ16586 387 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 CATSPEREQ5SY80 951 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 TMUB2Q71RG4 321 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 WDTC1Q8N5D0 677 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 CLDN19Q8N6F1 224 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 CDRT4Q8N9R6 151 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 OR5L2Q8NGL0 311 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 MITD1Q8WV92 249 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 NANOS1Q8WY41 292 aaKnown RBP6.52□□□□□ -1.37
SORT1-209ENST00000538502 DUS3LQ96G46 650 aaKnown RBP6.52□□□□□ -1.37
SORT1-209ENST00000538502 IFT22Q9H7X7 185 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 C12orf10Q9HB07 376 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 B4GALT6Q9UBX8 382 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 ZNF337Q9Y3M9 751 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 LPLP06858 475 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 LAMP1P11279 417 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 SPI1P17947 270 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 GCAP28676 217 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 HMGCLP35914 325 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 CTSOP43234 321 aaPredicted RBP6.52□□□□□ -1.37
SORT1-209ENST00000538502 HCCSP53701 268 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 CTXN1P60606 82 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 RBM39Q14498 530 aaKnown RBP6.52□□□□□ -1.37
SORT1-209ENST00000538502 PAN3Q58A45 887 aaKnown RBP6.52□□□□□ -1.37
SORT1-209ENST00000538502 CLECL1Q8IZS7 167 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 IQCF1Q8N6M8 205 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 OR4K13Q8NH42 304 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 MIB2Q96AX9 1013 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 PDLIM5Q96HC4 596 aaKnown RBP6.52□□□□□ -1.37
SORT1-209ENST00000538502 TSSK2Q96PF2 358 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 INTS14Q96SY0 518 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 C20orf85Q9H1P6 137 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 GNG13Q9P2W3 67 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 TESQ9UGI8 421 aaKnown RBP6.52□□□□□ -1.37
SORT1-209ENST00000538502 OR2F2O95006 317 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 SERPINE2P07093 398 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 PLCXD2Q0VAA5 305 aa6.52□□□□□ -1.37
SORT1-209ENST00000538502 OR2F1Q13607 317 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms