RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 MYNNQ9NPC7 610 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 TIGARQ9NQ88 270 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 MALRD1Q5VYJ5 2156 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 IGHV3-15A0A0B4J1V0 119 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 CCDC151A5D8V7 595 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 ZNF814B7Z6K7 855 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 ABCD4O14678 606 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 DLX3O60479 287 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 ENO1P06733 434 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 NGFRP08138 427 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 PRPS2P11908 318 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 ZNF16P17020 682 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 GPC1P35052 558 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 PRIM2P49643 509 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 RNF144AP50876 292 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 FOXA1P55317 472 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 IRX1P78414 480 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 LCP2Q13094 533 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 PPA1Q15181 289 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 CD226Q15762 336 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 IMPG1Q17R60 797 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 VPS26BQ4G0F5 336 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 ANKRD26P1Q6NSI1 321 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 DNAJC14Q6Y2X3 702 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 FCRLAQ7L513 359 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 OR2W6PQ8NHA6 318 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 B4GALNT2Q8NHY0 566 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 ADAD1Q96M93 576 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 C19orf24Q9BVV8 132 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 CDC42EP4Q9H3Q1 356 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 MANSC1Q9H8J5 431 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 SIRT5Q9NXA8 310 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 TAS2R7Q9NYW3 318 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 PRSS50Q9UI38 385 aa12.41□□□□□ -0.42
SMARCA4-206ENST00000538456 TTC36A6NLP5 189 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 SCDO00767 359 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 PRKD3O94806 890 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 KCNK2O95069 426 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 NKX2-2O95096 273 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 NUDT14O95848 222 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 YES1P07947 543 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 LINGO3P0C6S8 592 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 ACP2P11117 423 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 ENPP1P22413 925 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 MANFP55145 182 aaKnown RBP12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 PKNOX1P55347 436 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 VLDLRP98155 873 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 CCNJQ5T5M9 372 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 AGAP6Q5VW22 663 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 Q6ZT83 130 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 TDRPQ86YL5 185 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 ZNF525Q8N782 197 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 ARIH2OSQ8N7S6 290 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 OR10H5Q8NGA6 315 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 DCAKDQ8WVC6 231 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 JADE3Q92613 823 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 CIDECQ96AQ7 238 aaPredicted RBP12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 GRIP2Q9C0E4 1043 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 SHARPINQ9H0F6 387 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 HHATLQ9HCP6 504 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 MID1IP1Q9NPA3 183 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 UBQLN4Q9NRR5 601 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 NPAP1Q9NZP6 1156 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 TMEM216Q9P0N5 145 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 STK38LQ9Y2H1 464 aa12.4□□□□□ -0.42
SMARCA4-206ENST00000538456 C9JVG2 144 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 UBFD1O14562 309 aaKnown RBP12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 PDPK1O15530 556 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 EFNA2O43921 213 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 PYGBP11216 843 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 IMPDH1P20839 514 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 ATP5F1P24539 256 aaPredicted RBP12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 EDNRAP25101 427 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 ELK4P28324 431 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 MAP3K8P41279 467 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 EIF1P41567 113 aaKnown RBP12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 ZNF117Q03924 483 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 SPOCK1Q08629 439 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 DUSP5Q16690 384 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 TMEM176BQ3YBM2 270 aaPredicted RBP12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 SYT10Q6XYQ8 523 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 IL17RELQ6ZVW7 336 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 IKBIPQ70UQ0 350 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 MISPQ8IVT2 679 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 CDRT4Q8N9R6 151 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 SLC16A11Q8NCK7 471 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 NUP43Q8NFH3 380 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 FBXO27Q8NI29 283 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 KIF18AQ8NI77 898 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 HOXB13Q92826 284 aaPredicted RBP12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 ZNF775Q96BV0 537 aaPredicted RBP12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 MUCL1Q96DR8 90 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 EGLN2Q96KS0 407 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 MS4A4EQ96PG1 132 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 USB1Q9BQ65 265 aaKnown RBP12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 CXorf36Q9H7Y0 433 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 COQ10BQ9H8M1 238 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 GP6Q9HCN6 339 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms