RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 KLHL15Q96M94 604 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 SFXN2Q96NB2 322 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 RBP7Q96R05 134 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 SOSTQ9BQB4 213 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 RIOK2Q9BVS4 552 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ATG5Q9H1Y0 275 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 UGDHO60701 494 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 IFNA10P01566 189 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TCRBP04435 133 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 INHAP05111 366 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 IFNGR1P15260 489 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 GCGRP47871 477 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CRYBB1P53674 252 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 SF1Q15637 639 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 RAB30Q15771 203 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 MS4A13Q5J8X5 152 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 PLPP6Q8IY26 295 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 KDF1Q8NAX2 398 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OR2T33Q8NG76 320 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OR8J2Q8NGG1 315 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OR5D16Q8NGK9 328 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ZCCHC10Q8TBK6 192 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OSTF1Q92882 214 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 MARC2Q969Z3 335 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 FAM46AQ96IP4 442 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ELF4Q99607 663 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ACBD6Q9BR61 282 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 PINK1Q9BXM7 581 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 HRH4Q9H3N8 390 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 POLMQ9NP87 494 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CYSLTR2Q9NS75 346 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CTSFQ9UBX1 484 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 SCML1Q9UN30 329 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 DLGAP4Q9Y2H0 992 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CBY1Q9Y3M2 126 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OARD1Q9Y530 152 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TRIP11Q15643 1979 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 PCM1Q15154 2024 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 A0A0A6YYJ9 748 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OR6C75A6NL08 312 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 MAN2B1O00754 1011 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 FADS1O60427 444 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF821O75541 412 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 UCHL1P09936 223 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 AKR1C2P52895 323 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ART1P52961 327 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 RPS24P62847 133 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 SELENOWP63302 87 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 AKR1C1Q04828 323 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TDGQ13569 410 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 HTR4Q13639 388 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 GUCA2BQ16661 112 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 FAM26DQ5JW98 314 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CMIPQ8IY22 773 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 UMODL1-AS1Q8N2C9 162 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ARL14Q8N4G2 192 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OR5T3Q8NGG3 340 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OR5M9Q8NGP3 310 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 UPRTQ96BW1 309 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TIFAQ96CG3 184 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 MCHR1Q99705 422 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 FZD3Q9NPG1 666 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 MKKSQ9NPJ1 570 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 DZANK1Q9NVP4 752 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CNIH4Q9P003 139 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 AK6Q9Y3D8 172 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 MRPS23Q9Y3D9 190 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 FNDC1Q4ZHG4 1894 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TEX13DA0A0J9YY54 714 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 A0A0U1RQS6 177 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TMEM218A2RU14 115 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ANHXE9PGG2 379 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 GABRPO00591 440 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TSPAN15O95858 294 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TXNDC12O95881 172 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CBSLP0DN79 551 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CBSP35520 551 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CRYBB2P43320 205 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CDKN1CP49918 316 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF763Q0D2J5 394 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ELAVL2Q12926 359 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 NKPD1Q17RQ9 610 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TUSC1Q2TAM9 212 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TP53I3Q53FA7 332 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 AKR1C8PQ5T2L2 129 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CD200R1LQ6Q8B3 271 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 Q6ZSR9 355 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OR14K1Q8NGZ2 314 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OR52N1Q8NH53 320 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 MFRPQ9BY79 579 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ZFP64Q9NPA5 681 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ENPP4Q9Y6X5 453 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 EPHX1P07099 455 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 RPS10P46783 165 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 MECP2P51608 486 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 SEC61A1P61619 476 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CAMK2DQ13557 499 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 KIAA0040Q15053 153 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms