RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 ANXA11P50995 505 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SSX1Q16384 188 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CLPPQ16740 277 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TSTQ16762 297 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 FAM214AQ32MH5 1076 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MFSD4BQ5TF39 518 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ARHGAP40Q5TG30 622 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 STEAP3Q658P3 488 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 THOC7Q6I9Y2 204 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 DGAT2L6Q6ZPD8 337 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 COX15Q7KZN9 410 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PPP1R3BQ86XI6 285 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 RBM45Q8IUH3 476 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CYP4Z2PQ8N1L4 340 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 FAM26EQ8N5C1 309 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 WDR36Q8NI36 951 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 C17orf50Q8WW18 174 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 KAT2AQ92830 837 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 COL26A1Q96A83 441 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ANKRD9Q96BM1 317 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MOAP1Q96BY2 351 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ZNF486Q96H40 463 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TMEM80Q96HE8 168 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OPALINQ96PE5 141 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CDC6Q99741 560 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CHCHD6Q9BRQ6 235 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 POLR2J3Q9H1A7 115 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SLC22A11Q9NSA0 550 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TAS2R16Q9NYV7 291 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TRPC4Q9UBN4 977 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CLDN16Q9Y5I7 305 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SPACA6W5XKT8 324 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TEX51A0A1B0GUA7 166 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 H0YIG0 161 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 RGS13O14921 159 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 DYRK3O43781 588 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 LGI1O95970 557 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CPMP14384 443 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 FBLP22087 321 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TCEA1P23193 301 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CCKBRP32239 447 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 GPC1P35052 558 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SOX6P35712 828 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SOX18P35713 384 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 KHKP50053 298 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 EFNB1P98172 346 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TRA2AQ13595 282 aaKnown RBP eCLIP11.99□□□□□ -0.491e-7■□□□□ 8.1
CDK5RAP3-202ENST00000536708 TP53BP2Q13625 1128 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 DSG2Q14126 1118 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 GNA13Q14344 377 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MED22Q15528 200 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CEBPEQ15744 281 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SOWAHCQ53LP3 525 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 VWA2Q5GFL6 755 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 RHBDD2Q6NTF9 364 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 BHLHB9Q6PI77 547 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CASP12Q6UXS9 341 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 DEF8Q6ZN54 512 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SHISA6Q6ZSJ9 500 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MARCH9Q86YJ5 346 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 LRRC25Q8N386 305 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PARP16Q8N5Y8 322 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 FAM83FQ8NEG4 500 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PROKR2Q8NFJ6 384 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CLIP3Q96DZ5 547 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 WFDC6Q9BQY6 131 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 POLDIP3Q9BY77 421 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SLC7A5P2Q9GIP4 190 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 C6orf62Q9GZU0 229 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 RNF167Q9H6Y7 350 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 AKIRIN1Q9H9L7 192 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 HHATLQ9HCP6 504 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ZNF780BQ9Y6R6 833 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 AHCTF1Q8WYP5 2266 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PNMA8CA0A1B0GUJ8 204 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 KIAA0513O60268 411 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CSO75390 466 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 UGT2B17O75795 530 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 HSMCR30P0CW71 290 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NR2F1P10589 423 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CSNK2A2P19784 350 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NR4A2P43354 598 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SKP1P63208 163 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CARTPTQ16568 116 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ISXQ2M1V0 245 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 HES3Q5TGS1 186 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 LCN10Q6JVE6 187 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 C1orf94Q6P1W5 598 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PODNL1Q6PEZ8 512 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 FAM111BQ6SJ93 734 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CCDC190Q86UF4 302 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NANOGP1Q8N7R0 232 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 GALNT6Q8NCL4 622 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OR4K14Q8NGD5 310 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 VANGL1Q8TAA9 524 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 XAGE5Q8WWM1 108 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NR4A3Q92570 626 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 FGF11Q92914 225 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 IL4I1Q96RQ9 567 aa11.99□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MESP1Q9BRJ9 268 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms