RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SH2D5Q6ZV89 423 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 SZRD1Q7Z422 152 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 ISCA2Q86U28 154 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.7□□□□□ -1.66
CLIP1-207ENST00000536634 C8orf44Q96CB5 159 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 FAM120BQ96EK7 910 aaKnown RBP4.7□□□□□ -1.66
CLIP1-207ENST00000536634 RMDN2Q96LZ7 410 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 CSPG4P5Q96PW8 444 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 GANQ9H2C0 597 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 ZNF160Q9HCG1 818 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 COQ3Q9NZJ6 369 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 CTSFQ9UBX1 484 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 RWDD2AQ9UIY3 292 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 RPL26L1Q9UNX3 145 aaKnown RBP4.7□□□□□ -1.66
CLIP1-207ENST00000536634 ZNF835Q9Y2P0 537 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 ARID1AO14497 2285 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 NKX2-6A6NCS4 301 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 PRPSAP2O60256 369 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 WDPCPO95876 746 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 NGFP01138 241 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 FRMD6-AS1P0C7T7 363 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 VCLP18206 1134 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 UGT1A4P22310 534 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 CD86P42081 329 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 SLC15A1P46059 708 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 HCAR3P49019 387 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 CDH11P55287 796 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 FOLH1Q04609 750 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 RBPJQ06330 500 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 DPYSL2Q16555 572 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 GRTP1Q5TC63 336 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 TXNRD3NBQ6F5E7 133 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 TMEM220Q6QAJ8 160 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 CORO6Q6QEF8 472 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 DET1Q7L5Y6 550 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 BIVMQ86UB2 503 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 MARVELD2Q8N4S9 558 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 DNAAF3Q8N9W5 541 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 WFDC11Q8NEX6 87 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 GDAP1Q8TB36 358 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 WDR20Q8TBZ3 569 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 AGAP11Q8TF27 550 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 CA5BP1Q8WTZ4 195 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 ZFAND2BQ8WV99 257 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 ANP32BQ92688 251 aaKnown RBP4.69□□□□□ -1.66
CLIP1-207ENST00000536634 HAS2Q92819 552 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 MAGED4Q96JG8 741 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 TIGD1Q96MW7 591 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 ZNF830Q96NB3 372 aaPredicted RBP4.69□□□□□ -1.66
CLIP1-207ENST00000536634 VPS35Q96QK1 796 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 TRIB3Q96RU7 358 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 ZNF559Q9BR84 538 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 AP1M1Q9BXS5 423 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 RTN4RQ9BZR6 473 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 UCK2Q9BZX2 261 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 GHITMQ9H3K2 345 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 CLSTN2Q9H4D0 955 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 XKR8Q9H6D3 395 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 ZWILCHQ9H900 591 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 CHMP1AQ9HD42 196 aaPredicted RBP4.69□□□□□ -1.66
CLIP1-207ENST00000536634 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.69□□□□□ -1.66
CLIP1-207ENST00000536634 RBM22Q9NW64 420 aaKnown RBP eCLIP4.69□□□□□ -1.66
CLIP1-207ENST00000536634 PLEKHA6Q9Y2H5 1048 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 ZNF407Q9C0G0 2248 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 TGP01266 2768 aa4.69□□□□□ -1.66
CLIP1-207ENST00000536634 A0A087X002 238 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 A0A1W2PQ09 198 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 ELOVL7A1L3X0 281 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 NR5A2O00482 541 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 GAPDHSO14556 408 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-207ENST00000536634 UGT1A9O60656 530 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 TOXO94900 526 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 HPP00738 406 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 COX6A1P12074 109 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 UGT1A6P19224 532 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 CA4P22748 312 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 POLR2FP61218 127 aaKnown RBP4.68□□□□□ -1.66
CLIP1-207ENST00000536634 CACNG1Q06432 222 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 BECN1Q14457 450 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 KRT33BQ14525 404 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 RBBP7Q16576 425 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 GPRC6AQ5T6X5 926 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 FAM205BPQ63HN1 556 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 SPESP1Q6UW49 350 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 FAM151BQ6UXP7 276 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 DOLPP1Q86YN1 238 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 PSTKQ8IV42 348 aaKnown RBP4.68□□□□□ -1.66
CLIP1-207ENST00000536634 MCOLN2Q8IZK6 566 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 DNAJC22Q8N4W6 341 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 ANKRD20A12PQ8NF67 263 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 OR52E1Q8NGJ3 308 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 FLVCR1-AS1Q8TAF5 88 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 PHF10Q8WUB8 498 aaKnown RBP4.68□□□□□ -1.66
CLIP1-207ENST00000536634 LCN9Q8WX39 176 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 GPR137Q96N19 417 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 PAFAH2Q99487 392 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 TUBGCP2Q9BSJ2 902 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 TRAF4Q9BUZ4 470 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-207ENST00000536634 HES7Q9BYE0 225 aa4.68□□□□□ -1.66
CLIP1-207ENST00000536634 SLC26A1Q9H2B4 701 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms