RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PRRG3Q9BZD7 231 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 DPH1Q9BZG8 443 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 ISYNA1Q9NPH2 558 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 ATP13A2Q9NQ11 1180 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 ZNF223Q9UK11 482 aaPredicted RBP12.39□□□□□ -0.43
VPS33B-202ENST00000535906 ITGB1BP2Q9UKP3 347 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 TBC1D24Q9ULP9 559 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 SPIN1Q9Y657 262 aaPredicted RBP12.39□□□□□ -0.43
VPS33B-202ENST00000535906 PCDH15Q96QU1 1955 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 A0A1W2PR77 199 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 DYRK3O43781 588 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 SRPX2O60687 465 aaPredicted RBP12.38□□□□□ -0.43
VPS33B-202ENST00000535906 AK1P00568 194 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 TSPAN19P0C672 248 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 ZGLP1P0C6A0 271 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 MAKP20794 623 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 CD27P26842 260 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 SSTR4P31391 388 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 CASP3P42574 277 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 EMDP50402 254 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 FXYD6P3P58550 94 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 MXD1Q05195 221 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 CCDC85BQ15834 202 aaPredicted RBP12.38□□□□□ -0.43
VPS33B-202ENST00000535906 PGGHGQ32M88 737 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 LRIT3Q3SXY7 679 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 AADACL4Q5VUY2 407 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 HSDL2Q6YN16 418 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 CLDN22Q8N7P3 220 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 CELF2-AS1Q8N7Q2 184 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 TMEM239Q8WW34 195 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 TM9SF4Q92544 642 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 TPK1Q9H3S4 243 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 DTX4Q9Y2E6 619 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 CMAHPQ9Y471 501 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 CSNK1G3Q9Y6M4 447 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 CDH10Q9Y6N8 788 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 METTL12A8MUP2 240 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 IGKV1D-16P01601 117 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 PROS1P07225 676 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 MSL3P1P0C860 447 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 RNH1P13489 461 aaKnown RBP12.38□□□□□ -0.43
VPS33B-202ENST00000535906 CDH11P55287 796 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 BTG2P78543 158 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 TPBGQ13641 420 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 ZNF79Q15937 498 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 PDZK1Q5T2W1 519 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 BBS1Q8NFJ9 593 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 OR2T33Q8NG76 320 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 FAM174AQ8TBP5 190 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 GATAD2BQ8WXI9 593 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 RIT1Q92963 219 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 TCTN2Q96GX1 697 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 RBM18Q96H35 190 aaKnown RBP12.38□□□□□ -0.43
VPS33B-202ENST00000535906 ENKD1Q9H0I2 346 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 UBQLN3Q9H347 655 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 UBE2ZQ9H832 354 aaPredicted RBP12.38□□□□□ -0.43
VPS33B-202ENST00000535906 MUTYHQ9UIF7 546 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 EXOSC1Q9Y3B2 195 aaKnown RBP12.38□□□□□ -0.43
VPS33B-202ENST00000535906 ABCA7Q8IZY2 2146 aa12.38□□□□□ -0.43
VPS33B-202ENST00000535906 HRO43593 1189 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 SSX4O60224 188 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 ADAM11O75078 769 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 LIMS3P0CW19 117 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 LIMS4P0CW20 117 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 DRD5P21918 477 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 CD79BP40259 229 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 GCGRP47871 477 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 TGM4P49221 684 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 STX4Q12846 297 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 UBXN2BQ14CS0 331 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 C22orf42Q6IC83 251 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 SPATC1Q76KD6 591 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 ZNF614Q8N883 585 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 CNOT9Q92600 299 aaKnown RBP12.37□□□□□ -0.43
VPS33B-202ENST00000535906 TMEM203Q969S6 136 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 KCTD7Q96MP8 289 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 SLC38A3Q99624 504 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 MED18Q9BUE0 208 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 SRRQ9GZT4 340 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 OR52D1Q9H346 318 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 FOLH1BQ9HBA9 442 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 SIDT1Q9NXL6 827 aaKnown RBP12.37□□□□□ -0.43
VPS33B-202ENST00000535906 SF3B6Q9Y3B4 125 aaKnown RBP12.37□□□□□ -0.43
VPS33B-202ENST00000535906 CLDN16Q9Y5I7 305 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 LRRTM2O43300 516 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 COQ9O75208 318 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 IFI30P13284 250 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 GABRA4P48169 554 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 GFERP55789 205 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 ZMAT1Q5H9K5 638 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 AGAP6Q5VW22 663 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 LHFPL3Q86UP9 236 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 GKN2Q86XP6 184 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 METTL27Q8N6F8 245 aaPredicted RBP12.37□□□□□ -0.43
VPS33B-202ENST00000535906 SCAIQ8N9R8 606 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 FAM181AQ8N9Y4 354 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 OR4F15Q8NGB8 312 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 PMM1Q92871 262 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 AGAP4Q96P64 663 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 LMF2Q9BU23 707 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms