RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 OR7G2Q8NG99 324 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.21□□□□□ -1.26
CLIP1-206ENST00000535290 WDR20Q8TBZ3 569 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 C22orf15Q8WYQ4 148 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 ZNF75CPQ92670 426 aaPredicted RBP7.21□□□□□ -1.26
CLIP1-206ENST00000535290 TM4SF18Q96CE8 201 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 DUX5Q96PT3 197 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 ZNF300Q96RE9 604 aaPredicted RBP7.21□□□□□ -1.26
CLIP1-206ENST00000535290 PSD2Q9BQI7 771 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 TBL1XR1Q9BZK7 514 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 SLITRK2Q9H156 845 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 CAB39LQ9H9S4 337 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 TIGARQ9NQ88 270 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 ACSS1Q9NUB1 689 aaPredicted RBP7.21□□□□□ -1.26
CLIP1-206ENST00000535290 OPTCQ9UBM4 332 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 DMGDHQ9UI17 866 aaKnown RBP7.21□□□□□ -1.26
CLIP1-206ENST00000535290 MOKQ9UQ07 419 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 CMYA5Q8N3K9 4069 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 B9A039 149 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 PHGDHO43175 533 aaKnown RBP7.2□□□□□ -1.26
CLIP1-206ENST00000535290 RGS14O43566 566 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 UTS2O95399 124 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 BCL10O95999 233 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 S100BP04271 92 aaPredicted RBP7.2□□□□□ -1.26
CLIP1-206ENST00000535290 VSIG8P0DPA2 414 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 ADRA2CP18825 462 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 ALDH9A1P49189 494 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 IDH3GP51553 393 aaPredicted RBP7.2□□□□□ -1.26
CLIP1-206ENST00000535290 RAB10P61026 200 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 SLC25A3Q00325 362 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 GABRA6Q16445 453 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 ERCC6LQ2NKX8 1250 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 GRAMD1BQ3KR37 738 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 TMEM176BQ3YBM2 270 aaPredicted RBP7.2□□□□□ -1.26
CLIP1-206ENST00000535290 LIPJQ5W064 366 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 CARM1Q86X55 608 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 ZNF100Q8IYN0 542 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 SLC43A2Q8N370 569 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 BPIFB2Q8N4F0 458 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 GATSQ8NAP1 163 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 TOR1AIP2Q8NFQ8 470 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 CLDND2Q8NHS1 167 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 UBTD2Q8WUN7 234 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 ERP27Q96DN0 273 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 CFAP36Q96G28 342 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 MUS81Q96NY9 551 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 SERPINI1Q99574 410 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 RAB1BQ9H0U4 201 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 PLK3Q9H4B4 646 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 NARFLQ9H6Q4 476 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 COQ10BQ9H8M1 238 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 PFDN4Q9NQP4 134 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 TREM2Q9NZC2 230 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 PDP1Q9P0J1 537 aaPredicted RBP7.2□□□□□ -1.26
CLIP1-206ENST00000535290 KLHL9Q9P2J3 617 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 MCM8Q9UJA3 840 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 ADAM29Q9UKF5 820 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 PSME2Q9UL46 239 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 RNF11Q9Y3C5 154 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 PCDHB14Q9Y5E9 798 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 ZNF780BQ9Y6R6 833 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 WNK2Q9Y3S1 2297 aa7.2□□□□□ -1.26
CLIP1-206ENST00000535290 TMEM229AB2RXF0 380 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 UBXN8O00124 270 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 WNT9BO14905 357 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 PLOD3O60568 738 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 KERAO60938 352 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 PIAS1O75925 651 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 PDE5AO76074 875 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 PNPP00491 289 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 IGKV1D-16P01601 117 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 OR4A8P0C604 315 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 DDX5P17844 614 aaKnown RBP7.19□□□□□ -1.26
CLIP1-206ENST00000535290 KHKP50053 298 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 PPOXP50336 477 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 ZNF41P51814 821 aaPredicted RBP7.19□□□□□ -1.26
CLIP1-206ENST00000535290 ATP6V0D1P61421 351 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 TAGLNQ01995 201 aaKnown RBP7.19□□□□□ -1.26
CLIP1-206ENST00000535290 RASGEF1BQ0VAM2 473 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 ZNF155Q12901 538 aaPredicted RBP7.19□□□□□ -1.26
CLIP1-206ENST00000535290 ADIPOQQ15848 244 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 DECR1Q16698 335 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 TCHHL1Q5QJ38 904 aaPredicted RBP7.19□□□□□ -1.26
CLIP1-206ENST00000535290 RNASEH2BQ5TBB1 312 aaKnown RBP7.19□□□□□ -1.26
CLIP1-206ENST00000535290 FBXW9Q5XUX1 488 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 COMMD6Q7Z4G1 85 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 C1QL2Q7Z5L3 287 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 GALNT5Q7Z7M9 940 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 PPIL6Q8IXY8 311 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 UBE2J2Q8N2K1 259 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 METTL4Q8N3J2 472 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 ATP6V1C2Q8NEY4 427 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 RNF217Q8TC41 542 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 ACTRT2Q8TDY3 377 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 TRPC4APQ8TEL6 797 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 UBASH3BQ8TF42 649 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 WDR60Q8WVS4 1066 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 SH3YL1Q96HL8 342 aaPredicted RBP7.19□□□□□ -1.26
CLIP1-206ENST00000535290 DESI2Q9BSY9 194 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 NAT9Q9BTE0 207 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms