RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 PEX5LQ8IYB4 626 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 GHDCQ8N2G8 530 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 C11orf65Q8NCR3 313 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 HIPK4Q8NE63 616 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 FAM71CQ8NEG0 241 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 B4GALNT2Q8NHY0 566 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 WDR60Q8WVS4 1066 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 OIT3Q8WWZ8 545 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 CNOT9Q92600 299 aaKnown RBP11.92□□□□□ -0.5
TMEM258-202ENST00000535042 C1GALT1C1Q96EU7 318 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 NSL1Q96IY1 281 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 NPAS1Q99742 590 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.92□□□□□ -0.5
TMEM258-202ENST00000535042 SPRR3Q9UBC9 169 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 TNFRSF10DQ9UBN6 386 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 SLC6A5Q9Y345 797 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 ZNF462Q96JM2 2506 aa11.92□□□□□ -0.5
TMEM258-202ENST00000535042 C15orf38-AP3S2A0A0A6YYH1 394 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 SHISA8B8ZZ34 492 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 EIF4E2O60573 245 aaKnown RBP11.91□□□□□ -0.5
TMEM258-202ENST00000535042 ADAM11O75078 769 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 CYP7B1O75881 506 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 UBTFL6P0CB48 400 aaPredicted RBP11.91□□□□□ -0.5
TMEM258-202ENST00000535042 ESRRAP11474 423 aaPredicted RBP11.91□□□□□ -0.5
TMEM258-202ENST00000535042 NID1P14543 1247 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 ETS2P15036 469 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 IL7RP16871 459 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 MSX1P28360 303 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 PCGF2P35227 344 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 P2RX1P51575 399 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 PCBP3P57721 371 aaKnown RBP11.91□□□□□ -0.5
TMEM258-202ENST00000535042 B3GALT5-AS1P59052 145 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 EEF1A1P68104 462 aaKnown RBP11.91□□□□□ -0.5
TMEM258-202ENST00000535042 LIPEQ05469 1076 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 SKP2Q13309 424 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 TOMM34Q15785 309 aaPredicted RBP11.91□□□□□ -0.5
TMEM258-202ENST00000535042 MRPL2Q5T653 305 aaKnown RBP11.91□□□□□ -0.5
TMEM258-202ENST00000535042 EIF3MQ7L2H7 374 aaKnown RBP11.91□□□□□ -0.5
TMEM258-202ENST00000535042 ARPINQ7Z6K5 226 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 COMTD1Q86VU5 262 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 CLIP4Q8N3C7 705 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 OR5M1Q8NGP8 315 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 OR14L1PQ8NHC6 308 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 NEIL3Q8TAT5 605 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 REXO5Q96IC2 774 aaKnown RBP11.91□□□□□ -0.5
TMEM258-202ENST00000535042 LAT2Q9GZY6 243 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 LDAHQ9H6V9 325 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 RLIMQ9NVW2 624 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 TAS2R10Q9NYW0 307 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 DKKL1Q9UK85 242 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 PACSIN3Q9UKS6 424 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 ANGPT4Q9Y264 503 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 ZNF443Q9Y2A4 671 aaPredicted RBP11.91□□□□□ -0.5
TMEM258-202ENST00000535042 RPH3AQ9Y2J0 694 aaPredicted RBP11.91□□□□□ -0.5
TMEM258-202ENST00000535042 MRPS18CQ9Y3D5 142 aaKnown RBP11.91□□□□□ -0.5
TMEM258-202ENST00000535042 GPC6Q9Y625 555 aaPredicted RBP11.91□□□□□ -0.5
TMEM258-202ENST00000535042 NCKAP5O14513 1909 aa11.91□□□□□ -0.5
TMEM258-202ENST00000535042 FAM220BPB1ANY3 271 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 M0QX08 132 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 AQP7O14520 342 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 SUSD5O60279 629 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 TPST1O60507 370 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 HCN1O60741 890 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 DNAJA2O60884 412 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 UBOX5O94941 541 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 EPPINO95925 133 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 THBS1P07996 1170 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 PABPC4LP0CB38 370 aaKnown RBP11.9□□□□□ -0.5
TMEM258-202ENST00000535042 HK1P19367 917 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 CPOXP36551 454 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 GSK3BP49841 420 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 CRYBA2P53672 197 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 TMEM44Q2T9K0 475 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 EIF2S3LQ2VIR3 472 aaKnown RBP11.9□□□□□ -0.5
TMEM258-202ENST00000535042 LIN52Q52LA3 116 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 ZNF311Q5JNZ3 666 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 DCST1Q5T197 706 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 ARHGAP11AQ6P4F7 1023 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 ATCAYQ86WG3 371 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 IFNEQ86WN2 208 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 OR5W2Q8NH69 310 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 POC1BQ8TC44 478 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 GPR119Q8TDV5 335 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 SPATA9Q9BWV2 254 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 EXO5Q9H790 373 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 PTGES2Q9H7Z7 377 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 HHATLQ9HCP6 504 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 MED17Q9NVC6 651 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 DNAJB12Q9NXW2 375 aaKnown RBP11.9□□□□□ -0.5
TMEM258-202ENST00000535042 TMEM181Q9P2C4 612 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 ABCD2Q9UBJ2 740 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 VDAC3Q9Y277 283 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 SLC35A3Q9Y2D2 325 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 ZNF835Q9Y2P0 537 aa11.9□□□□□ -0.5
TMEM258-202ENST00000535042 SPENQ96T58 3664 aaKnown RBP11.9□□□□□ -0.51
TMEM258-202ENST00000535042 CDHR4A6H8M9 788 aa11.89□□□□□ -0.51
TMEM258-202ENST00000535042 B2RBV5 119 aa11.89□□□□□ -0.51
TMEM258-202ENST00000535042 NPIPA2E9PIF3 369 aa11.89□□□□□ -0.51
TMEM258-202ENST00000535042 NPIPA3F8WFD2 350 aa11.89□□□□□ -0.51
TMEM258-202ENST00000535042 AP3D1O14617 1153 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms