RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	C7orf72	A4D263	438 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	SERINC4	A6NH21	518 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	FAM90A27P	A6NNH2	459 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	CYSRT1	A8MQ03	144 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	SHISA8	B8ZZ34	492 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382		H3BML4	177 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	C19orf84	I3L1E1	186 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	OIP5	O43482	229 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	KIAA0513	O60268	411 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	EIF4E2	O60573	245 aa	Known RBP	13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	TNFRSF21	O75509	655 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	UGT2B17	O75795	530 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	H6PD	O95479	791 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	ZNF17	P17021	662 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	NCF2	P19878	526 aa	Predicted RBP	13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	SUMO3	P55854	103 aa	Predicted RBP	13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	EEFSEC	P57772	596 aa	Known RBP	13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	HPCA	P84074	193 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	PLPPR5	Q32ZL2	321 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	GPAT3	Q53EU6	434 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	AGK	Q53H12	422 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	TYW3	Q6IPR3	259 aa	Known RBP	13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	SLC2A7	Q6PXP3	512 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	LIX1L	Q8IVB5	337 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	UBQLNL	Q8IYU4	475 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	ZNF619	Q8N2I2	560 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	MEIOB	Q8N635	442 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	SPDL1	Q96EA4	605 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	TRNT1	Q96Q11	434 aa	Known RBP	13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	KLHDC3	Q9BQ90	382 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	PAIP1	Q9H074	479 aa	Known RBP	13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	RABEP2	Q9H5N1	569 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	TPT1P8	Q9HAU6	139 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	SLC52A3	Q9NQ40	469 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	STOML1	Q9UBI4	398 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	TRIM33	Q9UPN9	1127 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	PCDHB14	Q9Y5E9	798 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	AP4B1	Q9Y6B7	739 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382	CACNA1C	Q13936	2221 aa		13.11	□□□□□ -0.31
CTSB-231	ENST00000534382		A0A0G2JND7	137 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	CENPVL1	A0A0U1RR11	272 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	NKX2-6	A6NCS4	301 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	CLCA1	A8K7I4	914 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	NR5A2	O00482	541 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	ZNF264	O43296	627 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	HNRNPR	O43390	633 aa	Known RBP	13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	NUDT14	O95848	222 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	LINGO3	P0C6S8	592 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	UBL4A	P11441	157 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	CRAT	P43155	626 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	MVD	P53602	400 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	CLDN15	P56746	228 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	CHRNE	Q04844	493 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	MAPK14	Q16539	360 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	SYPL1	Q16563	259 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	NDUFAF6	Q330K2	333 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	SLC25A35	Q3KQZ1	300 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	GTDC1	Q4AE62	458 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	FRRS1	Q6ZNA5	592 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	LRRC74B	Q6ZQY2	392 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	CHMP1B	Q7LBR1	199 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	ANKFN1	Q8N957	763 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	NAXE	Q8NCW5	288 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	WNT2B	Q93097	391 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	ZG16B	Q96DA0	208 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	AURKB	Q96GD4	344 aa	Predicted RBP	13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	NPAS1	Q99742	590 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	LAT2	Q9GZY6	243 aa		13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.1	□□□□□ -0.31
CTSB-231	ENST00000534382	ARHGAP21	Q5T5U3	1957 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382		A0A096LPI6	279 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382		H0YC42	278 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	CLIC1	O00299	241 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	SEC14L5	O43304	696 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	CSTA	P01040	98 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	CHRM4	P08173	479 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	TROVE2	P10155	538 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	NR2F1	P10589	423 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	ETFA	P13804	333 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	CAPN3	P20807	821 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	PSMA4	P25789	261 aa	Known RBP	13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	EIF1	P41567	113 aa	Known RBP	13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	ZNF136	P52737	540 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	SUCLG1	P53597	346 aa	Known RBP	13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	TPD52	P55327	224 aa	Predicted RBP	13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	CLDN20	P56880	219 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	GUCY1A3	Q02108	690 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	TFF3	Q07654	80 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	METTL21C	Q5VZV1	264 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	EIF3M	Q7L2H7	374 aa	Known RBP	13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	C9orf106	Q8NAJ2	232 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	TOR1AIP2	Q8NFQ8	470 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	OR5W2	Q8NH69	310 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	POC1B	Q8TC44	478 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	GPR119	Q8TDV5	335 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	SMPDL3B	Q92485	455 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	PMM1	Q92871	262 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	ARSG	Q96EG1	525 aa		13.09	□□□□□ -0.31
CTSB-231	ENST00000534382	RNF145	Q96MT1	663 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms