RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 POU6F2P78424 691 aaPredicted RBP17.03■□□□□ 0.32
SMPD1-208ENST00000533123 HOXC5Q00444 222 aa17.03■□□□□ 0.32
SMPD1-208ENST00000533123 CD47Q08722 323 aa17.03■□□□□ 0.32
SMPD1-208ENST00000533123 MEP1AQ16819 746 aa17.03■□□□□ 0.32
SMPD1-208ENST00000533123 C16orf47Q6ZP98 133 aaPredicted RBP17.03■□□□□ 0.32
SMPD1-208ENST00000533123 AQP11Q8NBQ7 271 aa17.03■□□□□ 0.32
SMPD1-208ENST00000533123 CHDHQ8NE62 594 aaPredicted RBP17.03■□□□□ 0.32
SMPD1-208ENST00000533123 GTPBP3Q969Y2 492 aaKnown RBP17.03■□□□□ 0.32
SMPD1-208ENST00000533123 LCORQ96JN0 433 aaPredicted RBP17.03■□□□□ 0.32
SMPD1-208ENST00000533123 DHRS1Q96LJ7 313 aa17.03■□□□□ 0.32
SMPD1-208ENST00000533123 AASSQ9UDR5 926 aa17.03■□□□□ 0.32
SMPD1-208ENST00000533123 ZNF443Q9Y2A4 671 aaPredicted RBP17.03■□□□□ 0.32
SMPD1-208ENST00000533123 PCSK5Q92824 1860 aa17.03■□□□□ 0.32
SMPD1-208ENST00000533123 KCNK2O95069 426 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 CDH2P19022 906 aaPredicted RBP17.02■□□□□ 0.32
SMPD1-208ENST00000533123 GSSP48637 474 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 NR0B1P51843 470 aaKnown RBP17.02■□□□□ 0.32
SMPD1-208ENST00000533123 ISL1P61371 349 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 NPRL3Q12980 569 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 MAPK14Q16539 360 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 PLAG1Q6DJT9 500 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 ZNF770Q6IQ21 691 aaPredicted RBP17.02■□□□□ 0.32
SMPD1-208ENST00000533123 LAIR2Q6ISS4 152 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 ZAR1Q86SH2 424 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 ADAMTS17Q8TE56 1095 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 ARHGDIGQ99819 225 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 GABARAPL3Q9BY60 117 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 MTHFD2LQ9H903 347 aaPredicted RBP17.02■□□□□ 0.32
SMPD1-208ENST00000533123 SLC13A4Q9UKG4 626 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 MSRB2Q9Y3D2 182 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 APC2O95996 2303 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 PEX12O00623 359 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 UGT2B11O75310 529 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 STX11O75558 287 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 UGT2B17O75795 530 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 ANXA8P13928 327 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 DRD5P21918 477 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 CBLP22681 906 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 PRKAR1BP31321 381 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 CLN3Q13286 438 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 ATP1A4Q13733 1029 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 EXT1Q16394 746 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 ZNF836Q6ZNA1 936 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 LSRQ86X29 649 aaPredicted RBP17.02■□□□□ 0.32
SMPD1-208ENST00000533123 RAB43Q86YS6 212 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 ELP5Q8TE02 316 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 GALNT8Q9NY28 637 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 KCNE5Q9UJ90 142 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 CBLCQ9ULV8 474 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 GMPPBQ9Y5P6 360 aa17.02■□□□□ 0.32
SMPD1-208ENST00000533123 CCDC160A6NGH7 325 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 AGAP5A6NIR3 686 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 SYT5O00445 386 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 GASTP01350 101 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 IGKV1D-16P01601 117 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 TRHRP34981 398 aaPredicted RBP17.01■□□□□ 0.31
SMPD1-208ENST00000533123 IL5RAQ01344 420 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 DHRS4L2Q6PKH6 230 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 CCDC71Q8IV32 467 aaPredicted RBP17.01■□□□□ 0.31
SMPD1-208ENST00000533123 PEX5LQ8IYB4 626 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 CNIH3Q8TBE1 160 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 MAN2C1Q9NTJ4 1040 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 NDRG4Q9ULP0 352 aaKnown RBP17.01■□□□□ 0.31
SMPD1-208ENST00000533123 NTNG1Q9Y2I2 539 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 DMXL2Q8TDJ6 3036 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 TRIM64A6NGJ6 449 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 FRG2CA6NGY1 282 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 TMEM200CA6NKL6 621 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 SOX30O94993 753 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 DCAF7P61962 342 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 RPP38P78345 283 aaKnown RBP17.01■□□□□ 0.31
SMPD1-208ENST00000533123 ATP1A1-AS1Q5TC04 95 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 PRR22Q8IZ63 422 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 ALDH16A1Q8IZ83 802 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 ZNF619Q8N2I2 560 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 BCORP1Q8N888 145 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 ZNF441Q8N8Z8 693 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 M1APQ8TC57 530 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 SLC7A13Q8TCU3 470 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 PRRC1Q96M27 445 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 PSD2Q9BQI7 771 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 FUZQ9BT04 418 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 FNDC11Q9BVV2 318 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 DEFB126Q9BYW3 111 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 ADNPQ9H2P0 1102 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 ACACAQ13085 2346 aa17.01■□□□□ 0.31
SMPD1-208ENST00000533123 TTC36A6NLP5 189 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 WWP2O00308 870 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 KIAA0513O60268 411 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 ZFAND5O76080 213 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 HPP00738 406 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 LSM11P83369 360 aaKnown RBP eCLIP17■□□□□ 0.31
SMPD1-208ENST00000533123 IL18R1Q13478 541 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 KEAP1Q14145 624 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 DCST1Q5T197 706 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 SGCDQ92629 289 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 FGF11Q92914 225 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 UBE2FQ969M7 185 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 MMP25Q9NPA2 562 aa17■□□□□ 0.31
SMPD1-208ENST00000533123 TMCC3Q9ULS5 477 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms