RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 MINDY4Q4G0A6 757 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 ARHGAP40Q5TG30 622 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 NXNL2Q5VZ03 156 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 ZNF620Q6ZNG0 422 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 RTL4Q6ZR62 310 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 Q7L0L9 218 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 SLC29A4Q7RTT9 530 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 PRICKLE2Q7Z3G6 844 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 MISPQ8IVT2 679 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 AMER2Q8N7J2 671 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 RCBTB1Q8NDN9 531 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 KBTBD8Q8NFY9 601 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 OR1L3Q8NH93 324 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 CCDC74AQ96AQ1 378 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 VMP1Q96GC9 406 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 LOXL4Q96JB6 756 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 COQ7Q99807 217 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 ZNF426Q9BUY5 554 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 CNPPD1Q9BV87 410 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 JAM3Q9BX67 310 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 QRSL1Q9H0R6 528 aaKnown RBP11.35□□□□□ -0.59
CHD7-211ENST00000532149 PLGRKTQ9HBL7 147 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 INPP5EQ9NRR6 644 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 TBC1D23Q9NUY8 699 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 TVP23BQ9NYZ1 205 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 MUTYHQ9UIF7 546 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 NXT1Q9UKK6 140 aaKnown RBP11.35□□□□□ -0.59
CHD7-211ENST00000532149 RARRES3Q9UL19 164 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 PCDHGB2Q9Y5G2 931 aa11.35□□□□□ -0.59
CHD7-211ENST00000532149 TMEM129A0AVI4 362 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 KDM4EB2RXH2 506 aaPredicted RBP11.34□□□□□ -0.59
CHD7-211ENST00000532149 TNFRSF10AO00220 468 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 CCRL2O00421 344 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 TLX2O43763 284 aaPredicted RBP11.34□□□□□ -0.59
CHD7-211ENST00000532149 EIF4E2O60573 245 aaKnown RBP11.34□□□□□ -0.59
CHD7-211ENST00000532149 ENTPD6O75354 484 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 BCAS1O75363 584 aaPredicted RBP11.34□□□□□ -0.59
CHD7-211ENST00000532149 CLPXO76031 633 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 CSTAP01040 98 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 IFNGP01579 166 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 IGKV3-11P04433 115 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 GP1BAP07359 652 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 DBTP11182 482 aaKnown RBP11.34□□□□□ -0.59
CHD7-211ENST00000532149 CKMT1AP12532 417 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 CD36P16671 472 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 NAGAP17050 411 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 TBXA2RP21731 343 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 PNLIPRP2P54317 469 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 MAPK14Q16539 360 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 CTF1Q16619 201 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 SMN1Q16637 294 aaKnown RBP11.34□□□□□ -0.59
CHD7-211ENST00000532149 HLA-BQ31612 363 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 ZNF829Q3KNS6 432 aaPredicted RBP11.34□□□□□ -0.59
CHD7-211ENST00000532149 KLHL26Q53HC5 615 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 SYT14P1Q58G82 188 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 NKAIN2Q5VXU1 208 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 WBP2NLQ6ICG8 309 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 SLC23A3Q6PIS1 610 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 FIGNL1Q6PIW4 674 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 C5orf46Q6UWT4 87 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 LINC00114Q6XXX2 140 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 CCDC81Q6ZN84 652 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 USP43Q70EL4 1123 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 COMTD1Q86VU5 262 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 NRMQ8IXM6 262 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 BCORP1Q8N888 145 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 TCEANCQ8N8B7 351 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 OR1N1Q8NGS0 311 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 OR8K3Q8NH51 312 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 SLC2A12Q8TD20 617 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 PTPMT1Q8WUK0 201 aaPredicted RBP11.34□□□□□ -0.59
CHD7-211ENST00000532149 LGALS12Q96DT0 336 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 IL4I1Q96RQ9 567 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 SH3GL3Q99963 347 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 YIPF2Q9BWQ6 316 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 TSSK6Q9BXA6 273 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 LRRN3Q9H3W5 708 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 ANKRA2Q9H9E1 313 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 C11orf16Q9NQ32 467 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 TMEM74BQ9NUR3 256 aa11.34□□□□□ -0.59
CHD7-211ENST00000532149 SIDT1Q9NXL6 827 aaKnown RBP11.34□□□□□ -0.59
CHD7-211ENST00000532149 DNAJB12Q9NXW2 375 aaKnown RBP11.34□□□□□ -0.59
CHD7-211ENST00000532149 C19orf25Q9UFG5 118 aaPredicted RBP11.34□□□□□ -0.59
CHD7-211ENST00000532149 TNRC6BQ9UPQ9 1833 aaKnown RBP11.33□□□□□ -0.6
CHD7-211ENST00000532149 GXYLT2A0PJZ3 443 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 TMX2-CTNND1H3BSU7 103 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 ATE1O95260 518 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 SCG5P05408 212 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 STSP08842 583 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 UBL4AP11441 157 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 MAOAP21397 527 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 PAICSP22234 425 aaKnown RBP11.33□□□□□ -0.6
CHD7-211ENST00000532149 GALP22466 123 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 SSTR4P31391 388 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 PTGER1P34995 402 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 MTNR1AP48039 350 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 MASP1P48740 699 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 CLK1P49759 484 aaKnown RBP11.33□□□□□ -0.6
CHD7-211ENST00000532149 SEPHS1P49903 392 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 PGDP52209 483 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms