RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 NEUROG1Q92886 237 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 ZNF764Q96H86 408 aaPredicted RBP16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 METTL2AQ96IZ6 378 aaKnown RBP16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 FCRL1Q96LA6 429 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 CCT7Q99832 543 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 TACO1Q9BSH4 297 aaKnown RBP16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 OR10A4Q9H209 315 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 OXSMQ9NWU1 459 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 ALPK2Q86TB3 2170 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 NPIPA5A0A0B4J1W7 369 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 RNF223E7ERA6 249 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 NPIPA7E9PJI5 369 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 CLOCKO15516 846 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 RGS14O43566 566 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 EFNA2O43921 213 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 TBX19O60806 448 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 SOX30O94993 753 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 NPIPA8P0DM63 369 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 NAA20P61599 178 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 ZNF117Q03924 483 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 PDE7AQ13946 482 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 VEZF1Q14119 521 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 CLEC12BQ2HXU8 276 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 RFTN2Q52LD8 501 aaPredicted RBP16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 PDSS1Q5T2R2 415 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 TFAP2EQ6VUC0 442 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 CXXC5Q7LFL8 322 aaKnown RBP16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 MISPQ8IVT2 679 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 TUSC5Q8IXB3 177 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 GABRG1Q8N1C3 465 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 CCDC63Q8NA47 563 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 STEAP2Q8NFT2 490 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 CDS1Q92903 461 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 CHMP6Q96FZ7 201 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 TXLNGYQ9BZA5 131 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 TUBB1Q9H4B7 451 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 HHATLQ9HCP6 504 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 GIN1Q9NXP7 522 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 RNF115Q9Y4L5 304 aa16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 YLPM1P49750 1951 aaKnown RBP16.4■□□□□ 0.22
SSSCA1-206ENST00000531405 A0A1W2PQD3 144 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 TMCC2O75069 709 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 SOD3P08294 240 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 LINC00032P0C843 101 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 CPA3P15088 417 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 CDKN1AP38936 164 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 SERPINB4P48594 390 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 POU6F2P78424 691 aaPredicted RBP16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 CCDC153Q494R4 210 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 GALNTL6Q49A17 601 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 EXOSC6Q5RKV6 272 aaKnown RBP16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 TMEM201Q5SNT2 666 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 GTF2IRD2BQ6EKJ0 949 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 CBLN3Q6UW01 205 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 GTF2IRD2Q86UP8 949 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 IFT20Q8IY31 132 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 GSPT2Q8IYD1 628 aaKnown RBP16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 PHOSPHO1Q8TCT1 267 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 FAM120BQ96EK7 910 aaKnown RBP16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 REXO5Q96IC2 774 aaKnown RBP16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 IQCGQ9H095 443 aaKnown RBP16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 SIRT3Q9NTG7 399 aaPredicted RBP16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 ACSS1Q9NUB1 689 aaPredicted RBP16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 KLHL13Q9P2N7 655 aa16.39■□□□□ 0.21
SSSCA1-206ENST00000531405 OVOL3O00110 214 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 AZIN1O14977 448 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 CRLF1O75462 422 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 NUDT14O95848 222 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 HMGN2P05204 90 aaKnown RBP16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 IL32P24001 234 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 LASP1Q14847 261 aaKnown RBP16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 TAB1Q15750 504 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 TOMM34Q15785 309 aaPredicted RBP16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 NDUFAF6Q330K2 333 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 NCMAPQ5T1S8 102 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 SFRP5Q5T4F7 317 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 LIPMQ5VYY2 423 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 ATP6V1C2Q8NEY4 427 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 FBXO27Q8NI29 283 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 FBXW5Q969U6 566 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 CPNE4Q96A23 557 aaPredicted RBP16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 BTBD2Q9BX70 525 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 HEATR1Q9H583 2144 aaKnown RBP16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 ZCCHC3Q9NUD5 404 aaKnown RBP16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 CARD8Q9Y2G2 431 aa16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 MAGED1Q9Y5V3 778 aaPredicted RBP16.38■□□□□ 0.21
SSSCA1-206ENST00000531405 IGHV3-15A0A0B4J1V0 119 aa16.37■□□□□ 0.21
SSSCA1-206ENST00000531405 SMIM23A6NLE4 172 aa16.37■□□□□ 0.21
SSSCA1-206ENST00000531405 TMEM233B4DJY2 109 aa16.37■□□□□ 0.21
SSSCA1-206ENST00000531405 LSM1O15116 133 aaKnown RBP16.37■□□□□ 0.21
SSSCA1-206ENST00000531405 ADAP00813 363 aa16.37■□□□□ 0.21
SSSCA1-206ENST00000531405 SHBGP04278 402 aa16.37■□□□□ 0.21
SSSCA1-206ENST00000531405 CD3EP07766 207 aa16.37■□□□□ 0.21
SSSCA1-206ENST00000531405 DANCRP0C864 163 aa16.37■□□□□ 0.21
SSSCA1-206ENST00000531405 PABPC4LP0CB38 370 aaKnown RBP16.37■□□□□ 0.21
SSSCA1-206ENST00000531405 ELK4P28324 431 aa16.37■□□□□ 0.21
SSSCA1-206ENST00000531405 LCN1P31025 176 aa16.37■□□□□ 0.21
SSSCA1-206ENST00000531405 CRHR1P34998 444 aa16.37■□□□□ 0.21
SSSCA1-206ENST00000531405 EIF1P41567 113 aaKnown RBP16.37■□□□□ 0.21
SSSCA1-206ENST00000531405 DMTNQ08495 405 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms