RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 JSRP1Q96MG2 331 aaPredicted RBP17.41■□□□□ 0.38
SMPD1-205ENST00000531303 SECISBP2Q96T21 854 aaKnown RBP17.41■□□□□ 0.38
SMPD1-205ENST00000531303 HES7Q9BYE0 225 aa17.41■□□□□ 0.38
SMPD1-205ENST00000531303 AMBRA1Q9C0C7 1298 aa17.41■□□□□ 0.38
SMPD1-205ENST00000531303 MAGIXQ9H6Y5 334 aa17.41■□□□□ 0.38
SMPD1-205ENST00000531303 S100A14Q9HCY8 104 aa17.41■□□□□ 0.38
SMPD1-205ENST00000531303 KLHL1Q9NR64 748 aa17.41■□□□□ 0.38
SMPD1-205ENST00000531303 SACM1LQ9NTJ5 587 aa17.41■□□□□ 0.38
SMPD1-205ENST00000531303 RYDENQ9NUL5 291 aaKnown RBP17.41■□□□□ 0.38
SMPD1-205ENST00000531303 CNIH4Q9P003 139 aa17.41■□□□□ 0.38
SMPD1-205ENST00000531303 NTNG1Q9Y2I2 539 aa17.41■□□□□ 0.38
SMPD1-205ENST00000531303 TPRP12270 2363 aaKnown RBP17.4■□□□□ 0.38
SMPD1-205ENST00000531303 A0A0G2JMM0 328 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 A0A1W2PPB8 328 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 A0A1W2PRS3 328 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 KIR3DP1A8MWS1 328 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 ADAM10O14672 748 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 TIPRLO75663 272 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 SEMG1P04279 462 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 GAS1P54826 345 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 GPR85P60893 370 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 KCNC4Q03721 635 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 ZNF117Q03924 483 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 INPP5JQ15735 1006 aaPredicted RBP17.4■□□□□ 0.38
SMPD1-205ENST00000531303 NRF1Q16656 503 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 KDF1Q8NAX2 398 aaPredicted RBP17.4■□□□□ 0.38
SMPD1-205ENST00000531303 OIT3Q8WWZ8 545 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 HAS2Q92819 552 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 POP5Q969H6 163 aaKnown RBP17.4■□□□□ 0.38
SMPD1-205ENST00000531303 PROK2Q9HC23 129 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 CTPS2Q9NRF8 586 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 SDHAF3Q9NRP4 125 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 PPP4R1LQ9P1A2 415 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 CSAG2Q9Y5P2 127 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 WIF1Q9Y5W5 379 aa17.4■□□□□ 0.38
SMPD1-205ENST00000531303 LOC400499M0QZD8 3231 aa17.39■□□□□ 0.38
SMPD1-205ENST00000531303 GNB5O14775 395 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 FABP3P05413 133 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 ADH7P40394 386 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 MASP1P48740 699 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 DNASE1L1P49184 302 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 C17orf67Q0P5P2 114 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 NPTX1Q15818 432 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 SLC30A6Q6NXT4 461 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 RNF138Q8WVD3 245 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 C7orf34Q96L11 122 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 SMAD5Q99717 465 aaKnown RBP17.39■□□□□ 0.37
SMPD1-205ENST00000531303 KLHDC3Q9BQ90 382 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 ANGPTL4Q9BY76 406 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 LAT2Q9GZY6 243 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 IL1RAPQ9NPH3 570 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 MED11Q9P086 117 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 HRH3Q9Y5N1 445 aa17.39■□□□□ 0.37
SMPD1-205ENST00000531303 CFAP47Q6ZTR5 3102 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 CACNA1GO43497 2377 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 H3BNX3 289 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 MKRN2OSH3BPM6 223 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 J3KTA2 159 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 AP3D1O14617 1153 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 ADAM11O75078 769 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 BAG2O95816 211 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 NUDT14O95848 222 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 ENDOUP21128 410 aaKnown RBP17.38■□□□□ 0.37
SMPD1-205ENST00000531303 KCNAB2Q13303 367 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 SKP2Q13309 424 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 SNTA1Q13424 505 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 ZSWIM7Q19AV6 140 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 COL28A1Q2UY09 1125 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 ZFP1Q6P2D0 407 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 GRAMD2AQ8IUY3 354 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 B4GALNT2Q8NHY0 566 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 DUS3LQ96G46 650 aaKnown RBP17.38■□□□□ 0.37
SMPD1-205ENST00000531303 C5orf34Q96MH7 638 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 MCHR1Q99705 422 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 RNF32Q9H0A6 362 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 NDUFAF4Q9P032 175 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 FAM32AQ9Y421 112 aaKnown RBP17.38■□□□□ 0.37
SMPD1-205ENST00000531303 MGAQ8IWI9 3026 aa17.38■□□□□ 0.37
SMPD1-205ENST00000531303 CPSF4LA6NMK7 179 aaKnown RBP17.37■□□□□ 0.37
SMPD1-205ENST00000531303 CDC40O60508 579 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMPD1-205ENST00000531303 TPST2O60704 377 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 SP1P08047 785 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 CD46P15529 392 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 CD97P48960 835 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 ZNF136P52737 540 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 RCN1Q15293 331 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 SLC25A25Q6KCM7 469 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 IGFL2Q6UWQ7 119 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 ZNF550Q7Z398 422 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 TSEN54Q7Z6J9 526 aaKnown RBP17.37■□□□□ 0.37
SMPD1-205ENST00000531303 PACS2Q86VP3 889 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 RANBP3LQ86VV4 465 aaPredicted RBP17.37■□□□□ 0.37
SMPD1-205ENST00000531303 MISPQ8IVT2 679 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 PAPD5Q8NDF8 572 aaKnown RBP17.37■□□□□ 0.37
SMPD1-205ENST00000531303 MDS2Q8NDY4 140 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 FAM71CQ8NEG0 241 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 DSN1Q9H410 356 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 YY1AP1Q9H869 796 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 DEPPQ9NTK1 212 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 RHCGQ9UBD6 479 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms