RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 IGHEP01854 428 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 APOC2P02655 101 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 CTNNA2P26232 953 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 PSMB4P28070 264 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 ADRA1AP35348 466 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 CD151P48509 253 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 MARCKSL1P49006 195 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 ZNF140P52738 457 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-213ENST00000530784 HADHBP55084 474 aaKnown RBP6.1□□□□□ -1.43
CSDE1-213ENST00000530784 RPA4Q13156 261 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 DEFB110Q30KQ9 67 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 KIAA1644Q3SXP7 199 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 GPR33Q49SQ1 333 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 ZRANB3Q5FWF4 1079 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 ANKRD20A2Q5SQ80 823 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 LCE1FQ5T754 118 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 ANKRD20A1Q5TYW2 823 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 C1orf189Q5VU69 101 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 ANKRD20A3Q5VUR7 823 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 MLIPQ5VWP3 458 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 C11orf63Q6NUN7 778 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 SPESP1Q6UW49 350 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 GALNT5Q7Z7M9 940 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 VSTM4Q8IW00 320 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 TAGAPQ8N103 731 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 L3MBTL4Q8NA19 623 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.1□□□□□ -1.43
CSDE1-213ENST00000530784 SNRNP40Q96DI7 357 aaKnown RBP6.1□□□□□ -1.43
CSDE1-213ENST00000530784 C19orf60Q96EN9 201 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 C19orf43Q9BQ61 176 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 TBL1YQ9BQ87 522 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 RHNO1Q9BSD3 238 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 HRH4Q9H3N8 390 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 FAM96AQ9H5X1 160 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 XKR8Q9H6D3 395 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 C10orf88Q9H8K7 445 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 PTRH2Q9Y3E5 179 aaKnown RBP6.1□□□□□ -1.43
CSDE1-213ENST00000530784 ALG6Q9Y672 507 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 AP1M2Q9Y6Q5 423 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 LRRK2Q5S007 2527 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 SPENQ96T58 3664 aaKnown RBP6.1□□□□□ -1.43
CSDE1-213ENST00000530784 IGLV3-16A0A075B6K0 115 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 ENO4A6NNW6 628 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 CCL22O00626 93 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 LIN7AO14910 233 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-213ENST00000530784 RSL1D1O76021 490 aaKnown RBP6.09□□□□□ -1.43
CSDE1-213ENST00000530784 AP2A2O94973 939 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 CLDN1O95832 211 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 UGT2B7P16662 529 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 PDHA2P29803 388 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 SHMT2P34897 504 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 MAGEA1P43355 309 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 EIF3EP60228 445 aaKnown RBP6.09□□□□□ -1.43
CSDE1-213ENST00000530784 DCDP81605 110 aaKnown RBP6.09□□□□□ -1.43
CSDE1-213ENST00000530784 OTUD4Q01804 1114 aaKnown RBP6.09□□□□□ -1.43
CSDE1-213ENST00000530784 ZNF658BQ4V348 819 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-213ENST00000530784 DCAF10Q5QP82 559 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 GCNT6Q5T4J0 391 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 RHBDD2Q6NTF9 364 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 CFAP161Q6P656 301 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 IGFL3Q6UXB1 125 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 TAS2R42Q7RTR8 314 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 SERPINA9Q86WD7 417 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 KRTAP7-1Q8IUC3 87 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 PLD3Q8IV08 490 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 GPALPP1Q8IXQ4 340 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 CLDN19Q8N6F1 224 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 OR2Y1Q8NGV0 311 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 CCDC110Q8TBZ0 833 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 ACTL9Q8TC94 416 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 TFGQ92734 400 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-213ENST00000530784 KRT35Q92764 455 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 SLC47A1Q96FL8 570 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 DNAJC1Q96KC8 554 aaKnown RBP6.09□□□□□ -1.43
CSDE1-213ENST00000530784 SPATA13Q96N96 652 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 GBP5Q96PP8 586 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 NRTNQ99748 197 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 AP1M1Q9BXS5 423 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 TEX12Q9BXU0 123 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 FAM60AQ9NP50 221 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 ASF1BQ9NVP2 202 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 P4HTMQ9NXG6 502 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 DHCR7Q9UBM7 475 aaKnown RBP6.09□□□□□ -1.43
CSDE1-213ENST00000530784 ASF1AQ9Y294 204 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 TMEM5Q9Y2B1 443 aa6.09□□□□□ -1.43
CSDE1-213ENST00000530784 DOPEY2Q9Y3R5 2298 aa6.09□□□□□ -1.44
CSDE1-213ENST00000530784 TRBV5-4A0A0C4DH59 114 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 A0A0J9YY10 115 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 A0A1W2PQ09 198 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 ANKUB1A6NFN9 424 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 MAGEB17A8MXT2 336 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 H3BMH7 237 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 H7C0S8 307 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 ZNF189O75820 626 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-213ENST00000530784 FTH1P02794 183 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 H1F0P07305 194 aaKnown RBP6.08□□□□□ -1.44
CSDE1-213ENST00000530784 CTNNA1P35221 906 aaKnown RBP6.08□□□□□ -1.44
CSDE1-213ENST00000530784 CETN2P41208 172 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 NSG1P42857 185 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 SLC15A1P46059 708 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms