RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 Q9UFV3 132 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 ZNF337Q9Y3M9 751 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 NCOA6Q14686 2063 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-215ENST00000528396 CACNA1CQ13936 2221 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 PHF3Q92576 2039 aaKnown RBP12.1□□□□□ -0.47
CAPN1-215ENST00000528396 NKX2-6A6NCS4 301 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 CLCA1A8K7I4 914 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 B4DXG7 233 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 SHISA8B8ZZ34 492 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 HMGN4O00479 90 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 KIAA0513O60268 411 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 EIF4E2O60573 245 aaKnown RBP12.1□□□□□ -0.47
CAPN1-215ENST00000528396 FCMRO60667 390 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 H6PDO95479 791 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 CSTAP01040 98 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 ZCCHC18P0CG32 403 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 ZNF708P17019 499 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 BMP5P22003 454 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 TIMP3P35625 211 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 ADH7P40394 386 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 EIF1P41567 113 aaKnown RBP12.1□□□□□ -0.47
CAPN1-215ENST00000528396 P2RX1P51575 399 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 SUMO3P55854 103 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-215ENST00000528396 CLDN18P56856 261 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 B3GALT5-AS1P59052 145 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 GUCY1A3Q02108 690 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 GNA13Q14344 377 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 ZNF141Q15928 474 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 SGCBQ16585 318 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 SLC25A35Q3KQZ1 300 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 ZNF787Q6DD87 383 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 BLOC1S3Q6QNY0 202 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 OLIG3Q7RTU3 272 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 ZNF619Q8N2I2 560 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 TNIP2Q8NFZ5 429 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 ZFP90Q8TF47 636 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 STON2Q8WXE9 905 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 TRNT1Q96Q11 434 aaKnown RBP12.1□□□□□ -0.47
CAPN1-215ENST00000528396 TPT1P8Q9HAU6 139 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 MED17Q9NVC6 651 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 FGFR1OP2Q9NVK5 253 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 TMEM45AQ9NWC5 275 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 THUMPD1Q9NXG2 353 aaKnown RBP12.1□□□□□ -0.47
CAPN1-215ENST00000528396 P2RX2Q9UBL9 471 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 AP4B1Q9Y6B7 739 aa12.1□□□□□ -0.47
CAPN1-215ENST00000528396 A0A096LPI6 279 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 SLC22A20A6NK97 555 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 NPIPB9F8W1W9 429 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 EIF1AYO14602 144 aaKnown RBP12.09□□□□□ -0.47
CAPN1-215ENST00000528396 ANGPT2O15123 496 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 HNRNPRO43390 633 aaKnown RBP12.09□□□□□ -0.47
CAPN1-215ENST00000528396 GUSBP08236 651 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 SNRPB2P08579 225 aaKnown RBP12.09□□□□□ -0.47
CAPN1-215ENST00000528396 UBTFL6P0CB48 400 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-215ENST00000528396 GRNP28799 593 aaKnown RBP12.09□□□□□ -0.47
CAPN1-215ENST00000528396 DSTNP60981 165 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 CBFBQ13951 182 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 CDSNQ15517 529 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 NDUFAF6Q330K2 333 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 COX20Q5RI15 118 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 PDSS1Q5T2R2 415 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 TYW3Q6IPR3 259 aaKnown RBP12.09□□□□□ -0.47
CAPN1-215ENST00000528396 GTPBP8Q8N3Z3 284 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-215ENST00000528396 OR5W2Q8NH69 310 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 OIT3Q8WWZ8 545 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 GTF2H4Q92759 462 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 WNT2BQ93097 391 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 MARVELD3Q96A59 401 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 AURKBQ96GD4 344 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-215ENST00000528396 RNF145Q96MT1 663 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 TMEM120AQ9BXJ8 343 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 PRRG4Q9BZD6 226 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 UCK2Q9BZX2 261 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 CALML5Q9NZT1 146 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-215ENST00000528396 SLC35A3Q9Y2D2 325 aa12.09□□□□□ -0.47
CAPN1-215ENST00000528396 TEX15Q9BXT5 2789 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 ABCA12Q86UK0 2595 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 C7orf72A4D263 438 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 MBD3L4A6NDZ8 208 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-215ENST00000528396 MBD3L3A6NE82 208 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-215ENST00000528396 MBD3L5A6NJ08 208 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-215ENST00000528396 C5orf58C9J3I9 102 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 UGT2B17O75795 530 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 TMIGD3P0DMS9 266 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-215ENST00000528396 ETFAP13804 333 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 PPIBP23284 216 aaKnown RBP12.08□□□□□ -0.48
CAPN1-215ENST00000528396 OPRM1P35372 400 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 ARFIP2P53365 341 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 CHRNEQ04844 493 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 SYPL1Q16563 259 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 PLPPR5Q32ZL2 321 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 GTDC1Q4AE62 458 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 METTL21CQ5VZV1 264 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 OR2A2Q6IF42 318 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 CBLN3Q6UW01 205 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 FRRS1Q6ZNA5 592 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 LRRC74BQ6ZQY2 392 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 PEX5LQ8IYB4 626 aa12.08□□□□□ -0.48
CAPN1-215ENST00000528396 ANKFN1Q8N957 763 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms