RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 ZIC3O60481 467 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 DBIP07108 87 aaKnown RBP15.11■□□□□ 0.01
SMCO4-204ENST00000527149 THBS1P07996 1170 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 MSX1P28360 303 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 SUMO3P55854 103 aaPredicted RBP15.11■□□□□ 0.01
SMCO4-204ENST00000527149 B3GALT5-AS1P59052 145 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 EEF1A1P68104 462 aaKnown RBP15.11■□□□□ 0.01
SMCO4-204ENST00000527149 SLC10A1Q14973 349 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 TMEM44Q2T9K0 475 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 EIPR1Q53HC9 387 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 KRTCAP3Q53RY4 240 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 RNF220Q5VTB9 566 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 ZNF836Q6ZNA1 936 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 COMTD1Q86VU5 262 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 VRK2Q86Y07 508 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 CMIPQ8IY22 773 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 PEX5LQ8IYB4 626 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 PGAM4Q8N0Y7 254 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 GHDCQ8N2G8 530 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 GALNT11Q8NCW6 608 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 OR52P1PQ8NH57 321 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 WDR60Q8WVS4 1066 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 CNOT9Q92600 299 aaKnown RBP15.11■□□□□ 0.01
SMCO4-204ENST00000527149 ARSGQ96EG1 525 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 ECSITQ9BQ95 431 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 PIF1Q9H611 641 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 HHATLQ9HCP6 504 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 DNAJB12Q9NXW2 375 aaKnown RBP15.11■□□□□ 0.01
SMCO4-204ENST00000527149 TMEM181Q9P2C4 612 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 SPRR3Q9UBC9 169 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 SEC14L3Q9UDX4 400 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 ZNF443Q9Y2A4 671 aaPredicted RBP15.11■□□□□ 0.01
SMCO4-204ENST00000527149 SLC35A3Q9Y2D2 325 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 CARD8Q9Y2G2 431 aa15.11■□□□□ 0.01
SMCO4-204ENST00000527149 MRPS18CQ9Y3D5 142 aaKnown RBP15.11■□□□□ 0.01
SMCO4-204ENST00000527149 CDHR4A6H8M9 788 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 C5orf58C9J3I9 102 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 H3BNH8 94 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 ZNHIT1O43257 154 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 ZNF264O43296 627 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 EIF4E2O60573 245 aaKnown RBP15.1■□□□□ 0.01
SMCO4-204ENST00000527149 HCN1O60741 890 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 UBOX5O94941 541 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 EPPINO95925 133 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 CSTAP01040 98 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 PLA2G2AP14555 144 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 DPP4P27487 766 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 AQP1P29972 269 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 GSK3BP49841 420 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 DSCR4P56555 118 aaPredicted RBP15.1■□□□□ 0.01
SMCO4-204ENST00000527149 KCNJ10P78508 379 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 LIPEQ05469 1076 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 MRPL49Q13405 166 aaKnown RBP15.1■□□□□ 0.01
SMCO4-204ENST00000527149 GANABQ14697 944 aaKnown RBP15.1■□□□□ 0.01
SMCO4-204ENST00000527149 LIN52Q52LA3 116 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 MRPL2Q5T653 305 aaKnown RBP15.1■□□□□ 0.01
SMCO4-204ENST00000527149 ARSKQ6UWY0 536 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 EIF3MQ7L2H7 374 aaKnown RBP15.1■□□□□ 0.01
SMCO4-204ENST00000527149 YRDCQ86U90 279 aaKnown RBP15.1■□□□□ 0.01
SMCO4-204ENST00000527149 TOR1AIP2Q8NFQ8 470 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 B4GALNT2Q8NHY0 566 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 NEIL3Q8TAT5 605 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 NSL1Q96IY1 281 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 NPAS1Q99742 590 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 LAT2Q9GZY6 243 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 SPAG4Q9NPE6 437 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 EXOSC3Q9NQT5 275 aaKnown RBP15.1■□□□□ 0.01
SMCO4-204ENST00000527149 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.1■□□□□ 0.01
SMCO4-204ENST00000527149 ANGPT4Q9Y264 503 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 AP3M1Q9Y2T2 418 aa15.1■□□□□ 0.01
SMCO4-204ENST00000527149 PCNX1Q96RV3 2341 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 TRGV5A0A0B4J1U4 118 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 ANKUB1A6NFN9 424 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 ETV2O00321 342 aaPredicted RBP15.09■□□□□ 0.01
SMCO4-204ENST00000527149 AQP7O14520 342 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 GMFGO60234 142 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 SUSD5O60279 629 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 CDC40O60508 579 aaKnown RBP eCLIP15.09■□□□□ 0.01
SMCO4-204ENST00000527149 PDE9AO76083 593 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 WISP1O95388 367 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 LINGO3P0C6S8 592 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 PABPC4LP0CB38 370 aaKnown RBP15.09■□□□□ 0.01
SMCO4-204ENST00000527149 UBTFL6P0CB48 400 aaPredicted RBP15.09■□□□□ 0.01
SMCO4-204ENST00000527149 ESRRAP11474 423 aaPredicted RBP15.09■□□□□ 0.01
SMCO4-204ENST00000527149 CALB2P22676 271 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 UQCRFS1P47985 274 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 P2RX1P51575 399 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 GFRA1P56159 465 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 EEFSECP57772 596 aaKnown RBP15.09■□□□□ 0.01
SMCO4-204ENST00000527149 SLC25A3Q00325 362 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 VEZF1Q14119 521 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 PLPPR5Q32ZL2 321 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 WIPI1Q5MNZ9 446 aaPredicted RBP15.09■□□□□ 0.01
SMCO4-204ENST00000527149 ERICH5Q6P6B1 374 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 GFRALQ6UXV0 394 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 CCDC80Q76M96 950 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 ZNF605Q86T29 641 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 GRAMD2AQ8IUY3 354 aa15.09■□□□□ 0.01
SMCO4-204ENST00000527149 RBM15BQ8NDT2 890 aaKnown RBP15.09■□□□□ 0.01
SMCO4-204ENST00000527149 OR2T12Q8NG77 320 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms