RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 SIRPDQ9H106 197 aa2.68□□□□□ -1.98
CSDE1-209ENST00000525132 LRMDAQ9H2I8 198 aa2.68□□□□□ -1.98
CSDE1-209ENST00000525132 CDC42EP4Q9H3Q1 356 aaKnown RBP2.68□□□□□ -1.98
CSDE1-209ENST00000525132 LRRC40Q9H9A6 602 aa2.68□□□□□ -1.98
CSDE1-209ENST00000525132 ACKR4Q9NPB9 350 aa2.68□□□□□ -1.98
CSDE1-209ENST00000525132 GPR173Q9NS66 373 aa2.68□□□□□ -1.98
CSDE1-209ENST00000525132 HOMER3Q9NSC5 361 aa2.68□□□□□ -1.98
CSDE1-209ENST00000525132 FARSBQ9NSD9 589 aaKnown RBP2.68□□□□□ -1.98
CSDE1-209ENST00000525132 KLHL9Q9P2J3 617 aa2.68□□□□□ -1.98
CSDE1-209ENST00000525132 MALT1Q9UDY8 824 aa2.68□□□□□ -1.98
CSDE1-209ENST00000525132 NOCTQ9UK39 431 aaKnown RBP2.68□□□□□ -1.98
CSDE1-209ENST00000525132 WDR83OSQ9Y284 106 aa2.68□□□□□ -1.98
CSDE1-209ENST00000525132 TMED3Q9Y3Q3 217 aa2.68□□□□□ -1.98
CSDE1-209ENST00000525132 SPIN1Q9Y657 262 aaPredicted RBP2.68□□□□□ -1.98
CSDE1-209ENST00000525132 FAM230AA0A1W2PPH8 454 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 hDV102S1A0JD36 115 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 CTAGE15A4D2H0 777 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 GAGE12JA6NER3 117 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 C15orf62A8K5M9 175 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 F8VVB4 439 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 F8VWA3 439 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 NPIPA3F8WFD2 350 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 MS4A18H0YCH9 400 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 I6L893 689 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 MDM4O15151 490 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 MAGEB3O15480 346 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 VPS26AO75436 327 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 ZNF821O75541 412 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 OAZ2O95190 189 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 OAS1P00973 400 aaKnown RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 IGHV4-39P01824 125 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 IGKV2-30P06310 120 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 CHRNGP07510 517 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 CTAGE8P0CG41 777 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 PSG1P11464 419 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 B4GALT1P15291 398 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 NAGAP17050 411 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 DPP4P27487 766 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 HLA-FP30511 346 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 CORO1AP31146 461 aaKnown RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 OTX2P32243 289 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 TAGLN2P37802 199 aaKnown RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 ATP5OP48047 213 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 RASSF2P50749 326 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 CLCNKAP51800 687 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 SEC61BP60468 96 aaKnown RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 SSTP61278 116 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 IRX1P78414 480 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 CCZ1BP86790 482 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 CCZ1P86791 482 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 ROR2Q01974 943 aaKnown RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 GBE1Q04446 702 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 EEF1A2Q05639 463 aaKnown RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 CACNG1Q06432 222 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 KIF5AQ12840 1032 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 IL24Q13007 206 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 EIF4EBP2Q13542 120 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 SNX1Q13596 522 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 PDIA5Q14554 519 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 ZMYND11Q15326 602 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 CLPPQ16740 277 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 CA9Q16790 459 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 QRICH1Q2TAL8 776 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 ZNF284Q2VY69 593 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 SLC25A35Q3KQZ1 300 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 UGT3A2Q3SY77 523 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 KCTD21Q4G0X4 260 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 GLIPR1L2Q4G1C9 344 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 RAB6CQ53S08 254 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 PXDC1Q5TGL8 231 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 TYW3Q6IPR3 259 aaKnown RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 ZYG11AQ6WRX3 759 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 CTAGE6Q86UF2 777 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 CTAGE4Q8IX94 777 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 ZNF679Q8IYX0 411 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 LGI2Q8N0V4 545 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 GBGT1Q8N5D6 347 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 OTUD6BQ8N6M0 293 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 EIF1ADQ8N9N8 165 aaKnown RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 CCDC63Q8NA47 563 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 PPFIBP2Q8ND30 876 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 OR4K1Q8NGD4 311 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 OR14A16Q8NHC5 309 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 RNASE6Q93091 150 aaKnown RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 ULK4Q96C45 1275 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 HMCESQ96FZ2 354 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 TCEANC2Q96MN5 208 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 TSSK2Q96PF2 358 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 CCT7Q99832 543 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 NTMT1Q9BV86 223 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 FICDQ9BVA6 458 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 RAB6CQ9H0N0 254 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 RIMS4Q9H426 269 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 TMEM231Q9H6L2 316 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 C10orf88Q9H8K7 445 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 Q9H8V8 135 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 ROPN1Q9HAT0 212 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 PHPT1Q9NRX4 125 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-209ENST00000525132 NMRK1Q9NWW6 199 aa2.67□□□□□ -1.98
CSDE1-209ENST00000525132 SMPD3Q9NY59 655 aaPredicted RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms