RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 COLEC10Q9Y6Z7 277 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 NCKAP5O14513 1909 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 PTPRQQ9UMZ3 2332 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 A0A0J9YVX5 310 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 ARHGAP10A1A4S6 786 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 EFCAB7A8K855 629 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 HSPB2A8KAH6 182 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 C2orf74A8MZ97 194 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 K7EPI3 171 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 SOCS6O14544 535 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 DYNC1I1O14576 645 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 STK16O75716 305 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 SUPT7LO94864 414 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 OR4F21O95013 312 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 RPN2P04844 631 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 CHRNGP07510 517 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 BPGMP07738 259 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 RBP1P09455 135 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 HIST1H2AGP0C0S8 130 aaPredicted RBP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 ANKRD34CP0C6C1 535 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 RNF224P0DH78 156 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 GFAPP14136 432 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 CPA3P15088 417 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 NELFEP18615 380 aaKnown RBP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 HIST1H2ADP20671 130 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 IMPDH1P20839 514 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 BGNP21810 368 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 CDH3P22223 829 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 HPDP32754 393 aaPredicted RBP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 TIMP3P35625 211 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 CCT5P48643 541 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 HNMTP50135 292 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 NAGLUP54802 743 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 NR1H2P55055 460 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 ERVPABLB-1P60509 514 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 HERVK_113P63132 956 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 REEP5Q00765 189 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 ILF2Q12905 390 aaKnown RBP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 CDC16Q13042 620 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 CHIT1Q13231 466 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 SRSF6Q13247 344 aaKnown RBP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 ILKQ13418 452 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 TSTA3Q13630 321 aaPredicted RBP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 GTF2H2Q13888 395 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 RUNX2Q13950 521 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 DOC2AQ14183 400 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 KRT33BQ14525 404 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 KIR2DS3Q14952 304 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 ARHGAP19Q14CB8 494 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 HSPB2Q16082 182 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 PDK4Q16654 411 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 CCDC153Q494R4 210 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 CDKL4Q5MAI5 379 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 LGSNQ5TDP6 509 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 CLEC6AQ6EIG7 209 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 LCN10Q6JVE6 187 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 CGB2Q6NT52 195 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 GTF2H2CQ6P1K8 395 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 TTC23LQ6PF05 361 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 FIGLAQ6QHK4 219 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 CCDC91Q7Z6B0 441 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 TMPRSS11BQ86T26 416 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 SYVN1Q86TM6 617 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 NFE4Q86UQ8 179 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 LCA5Q86VQ0 697 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 DNAJC22Q8N4W6 341 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 TEX9Q8N6V9 391 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 AMER3Q8N944 861 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 GJC3Q8NFK1 279 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 OR4F6Q8NGB9 312 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 OR1L3Q8NH93 324 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 WDR20Q8TBZ3 569 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 MAGEC3Q8TD91 643 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 MGARPQ8TDB4 240 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 TRPC4APQ8TEL6 797 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 AGAP11Q8TF27 550 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 SLC5A11Q8WWX8 675 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 UCN3Q969E3 161 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 ZNF501Q96CX3 271 aaPredicted RBP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 TM4SF19Q96DZ7 209 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 WDR34Q96EX3 536 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 SLC45A3Q96JT2 553 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 C10orf90Q96M02 699 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 ZNF285Q96NJ3 590 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 OR2A5Q96R48 311 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 OR6C1Q96RD1 312 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 PCNX1Q96RV3 2341 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 SMC6Q96SB8 1091 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 RUFY1Q96T51 708 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 HBEGFQ99075 208 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 SELENOSQ9BQE4 189 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 H2AFJQ9BTM1 129 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 DPH7Q9BTV6 452 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 RBM4Q9BWF3 364 aaKnown RBP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 RAB11FIP5Q9BXF6 653 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 ERVK-6Q9BXR3 956 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 SHCBP1LQ9BZQ2 653 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 TUBB1Q9H4B7 451 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 SLC32A1Q9H598 525 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms