RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 SNX3O60493 162 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 NR2F1P10589 423 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 UBL4AP11441 157 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 ESRRAP11474 423 aaPredicted RBP13.69□□□□□ -0.22
SF3B2-202ENST00000524475 HK1P19367 917 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 P2RX1P51575 399 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 SEC24CP53992 1094 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 CRISP3P54108 245 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 GNGT1P63211 74 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 ZNF117Q03924 483 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 CHRNEQ04844 493 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 MAPK14Q16539 360 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 RUNDC3AQ59EK9 446 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 EIF3MQ7L2H7 374 aaKnown RBP13.69□□□□□ -0.22
SF3B2-202ENST00000524475 ULK2Q8IYT8 1036 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 GTPBP8Q8N3Z3 284 aaPredicted RBP13.69□□□□□ -0.22
SF3B2-202ENST00000524475 ANKFN1Q8N957 763 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 SLC38A5Q8WUX1 472 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 WDYHV1Q96HA8 205 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 SFXN2Q96NB2 322 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 ANKRD27Q96NW4 1050 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 CGREF1Q99674 301 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 PIGQQ9BRB3 760 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 CPPED1Q9BRF8 314 aaPredicted RBP13.69□□□□□ -0.22
SF3B2-202ENST00000524475 LAT2Q9GZY6 243 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 TMEM38AQ9H6F2 299 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 BCL2L10Q9HD36 194 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 EXOSC3Q9NQT5 275 aaKnown RBP13.69□□□□□ -0.22
SF3B2-202ENST00000524475 L3MBTL1Q9Y468 752 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 HEATR5AQ86XA9 2040 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 FLNBO75369 2602 aaKnown RBP13.69□□□□□ -0.22
SF3B2-202ENST00000524475 ARHGAP21Q5T5U3 1957 aa13.69□□□□□ -0.22
SF3B2-202ENST00000524475 CENPVL1A0A0U1RR11 272 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 OR2M5A3KFT3 312 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 FAM47E-STBD1D6RA91 191 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 GTPBP1O00178 669 aaKnown RBP13.68□□□□□ -0.22
SF3B2-202ENST00000524475 ZNF708P17019 499 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 ADH6P28332 368 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 EIF1P41567 113 aaKnown RBP13.68□□□□□ -0.22
SF3B2-202ENST00000524475 LHX2P50458 406 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 ADORA2A-AS1P86434 159 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 SKP2Q13309 424 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 ZSWIM7Q19AV6 140 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 TRMT5Q32P41 509 aaKnown RBP13.68□□□□□ -0.22
SF3B2-202ENST00000524475 PLPPR5Q32ZL2 321 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 GATSQ8NAP1 163 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 OR5M9Q8NGP3 310 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 ZPLD1Q8TCW7 415 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 UCN2Q96RP3 112 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 TREX2Q9BQ50 279 aaPredicted RBP13.68□□□□□ -0.22
SF3B2-202ENST00000524475 ELAC2Q9BQ52 826 aaKnown RBP13.68□□□□□ -0.22
SF3B2-202ENST00000524475 RUBCNLQ9H714 662 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.68□□□□□ -0.22
SF3B2-202ENST00000524475 MED17Q9NVC6 651 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.68□□□□□ -0.22
SF3B2-202ENST00000524475 SH3BGRL2Q9UJC5 107 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 FAM215AQ9Y5M1 114 aa13.68□□□□□ -0.22
SF3B2-202ENST00000524475 ICE1Q9Y2F5 2266 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 A0A0G2JPF8 293 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 HNRNPCL2B2RXH8 293 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 HNRNPCL3B7ZW38 293 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 FBP2O00757 339 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 HNRNPCL1O60812 293 aaKnown RBP13.67□□□□□ -0.22
SF3B2-202ENST00000524475 DBIP07108 87 aaKnown RBP13.67□□□□□ -0.22
SF3B2-202ENST00000524475 THBS1P07996 1170 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 LINGO3P0C6S8 592 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 HNRNPCL4P0DMR1 293 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 ARAFP10398 606 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 PEPDP12955 493 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 NID1P14543 1247 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 PSMA4P25789 261 aaKnown RBP13.67□□□□□ -0.22
SF3B2-202ENST00000524475 ELK4P28324 431 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 PGM1P36871 562 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 ZNF41P51814 821 aaPredicted RBP13.67□□□□□ -0.22
SF3B2-202ENST00000524475 SMSP52788 366 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 GYS2P54840 703 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 DLX5P56178 289 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 CLDN18P56856 261 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 NFYCQ13952 458 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 ACSF3Q4G176 576 aaPredicted RBP13.67□□□□□ -0.22
SF3B2-202ENST00000524475 SLC25A53Q5H9E4 307 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 DCST1Q5T197 706 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 GCNT6Q5T4J0 391 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 C1orf185Q5T7R7 199 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 RAET1LQ5VY80 246 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 RTL6Q6ICC9 239 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 ZNF585AQ6P3V2 769 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 XKRXQ6PP77 449 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 CBLN3Q6UW01 205 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 ARSKQ6UWY0 536 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 B3GNT6Q6ZMB0 384 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 OLIG3Q7RTU3 272 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 CPLX4Q7Z7G2 160 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 ADGRE4PQ86SQ3 457 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 PEX5LQ8IYB4 626 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 ZNF808Q8N4W9 903 aaPredicted RBP13.67□□□□□ -0.22
SF3B2-202ENST00000524475 ZNF614Q8N883 585 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 OR5W2Q8NH69 310 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 ZG16BQ96DA0 208 aa13.67□□□□□ -0.22
SF3B2-202ENST00000524475 TMEM19Q96HH6 336 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms