RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	CA5B	Q9Y2D0	317 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	ALG5	Q9Y673	324 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	PCDH15	Q96QU1	1955 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	GON4L	Q3T8J9	2241 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	CACNA1E	Q15878	2313 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	MDC1	Q14676	2089 aa	Known RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	HEATR5B	Q9P2D3	2071 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	SHISA3	A0PJX4	238 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	TFEC	O14948	347 aa	Predicted RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR10H3	O60404	316 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	SDC3	O75056	442 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMCC2	O75069	709 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	NME6	O75414	186 aa	Predicted RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	PAK4	O96013	591 aa	Predicted RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	IGHA1	P01876	353 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	FH	P07954	510 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	CELA3A	P09093	270 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR12D1	P0DN82	309 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	ADRB3	P13945	408 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	GSTM3	P21266	225 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	HNRNPA2B1	P22626	353 aa	Known RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	APEX1	P27695	318 aa	Known RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	PKLR	P30613	574 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	CD79B	P40259	229 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	GIPR	P48546	466 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	EVX1	P49640	407 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	MAN2A2	P49641	1150 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	CLDN2	P57739	230 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	BTG1	P62324	171 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	RPS21	P63220	83 aa	Known RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	INSM1	Q01101	510 aa	Predicted RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	DMPK	Q09013	629 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	FUT5	Q11128	374 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMEM115	Q12893	351 aa	Predicted RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	TARDBP	Q13148	414 aa	Known RBP eCLIP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	SGCG	Q13326	291 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	GINS1	Q14691	196 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	TATDN3	Q17R31	274 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR2G6	Q5TZ20	316 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	HIST2H2AA3	Q6FI13	130 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	CNIH2	Q6PI25	160 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	BHLHB9	Q6PI77	547 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMEM220	Q6QAJ8	160 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMIGD1	Q6UXZ0	262 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	ADAMTSL4	Q6UY14	1074 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	DEF8	Q6ZN54	512 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033		Q6ZSR6	202 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZNF767P	Q75MW2	155 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZNF765	Q7L2R6	523 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	KANSL1	Q7Z3B3	1105 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZER1	Q7Z7L7	766 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	POGLUT1	Q8NBL1	392 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZNF740	Q8NDX6	193 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR4K5	Q8NGD3	323 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR52P1P	Q8NH57	321 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	BBS10	Q8TAM1	723 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	SFXN5	Q8TD22	340 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	AP3S1	Q92572	193 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	UFD1	Q92890	307 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	UPRT	Q96BW1	309 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZBED6CL	Q96FA7	236 aa	Predicted RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	DTD2	Q96FN9	168 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	SENP5	Q96HI0	755 aa	Predicted RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	DIRAS2	Q96HU8	199 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	LRIG1	Q96JA1	1093 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	ARHGDIG	Q99819	225 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMEM43	Q9BTV4	400 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	SORBS1	Q9BX66	1292 aa	Known RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	PLA2G12A	Q9BZM1	189 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	BCL2L10	Q9HD36	194 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	WASH6P	Q9NQA3	447 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	GIMAP4	Q9NUV9	329 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	ASB6	Q9NWX5	421 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	TAS2R7	Q9NYW3	318 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	TVP23B	Q9NYZ1	205 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	CBLC	Q9ULV8	474 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZFR2	Q9UPR6	939 aa	Known RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	POLH	Q9Y253	713 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	EXOG	Q9Y2C4	368 aa	Known RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	SPIN1	Q9Y657	262 aa	Predicted RBP	7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	HS3ST3A1	Q9Y663	406 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	AUP1	Q9Y679	476 aa		7.28	□□□□□ -1.24
SPIDR-223	ENST00000524033	C17orf113	A0A1B0GUU1	675 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	IGLON5	A6NGN9	336 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	C5orf58	C9J3I9	102 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033		M0R3H8	397 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	SAP18	O00422	153 aa	Known RBP	7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	SYT5	O00445	386 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	LRRTM2	O43300	516 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	LYRM1	O43325	122 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	KLF4	O43474	513 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	SIGLEC6	O43699	453 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	LALBA	P00709	142 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	TSPAN19	P0C672	248 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	NR2F6	P10588	404 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	CFL1	P23528	166 aa	Known RBP	7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	SSTR4	P31391	388 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	AGFG1	P52594	562 aa	Known RBP	7.27	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms