RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 GP6Q9HCN6 339 aa20.17■□□□□ 0.82
PVT1-218ENST00000523328 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.16■□□□□ 0.821e-10■■□□□ 12.6
PVT1-218ENST00000523328 IGHV4-30-2A0A087WSY4 118 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 SHISA9B4DS77 424 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 ZNF814B7Z6K7 855 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 RAMP1O60894 148 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 ELK4P28324 431 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 CASQ1P31415 396 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 PRIM2P49643 509 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 FOXF1Q12946 379 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 NOXRED1Q6NXP6 359 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 TIFABQ6ZNK6 161 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 TRIM46Q7Z4K8 759 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 TDRPQ86YL5 185 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 MISPQ8IVT2 679 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 OR6Y1Q8NGX8 325 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 B4GALNT2Q8NHY0 566 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 FBXO30Q8TB52 745 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 USB1Q9BQ65 265 aaKnown RBP20.16■□□□□ 0.82
PVT1-218ENST00000523328 ALG2Q9H553 416 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 MID1IP1Q9NPA3 183 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 UBQLN4Q9NRR5 601 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 CISD1Q9NZ45 108 aaKnown RBP20.16■□□□□ 0.82
PVT1-218ENST00000523328 NTMQ9P121 344 aa20.16■□□□□ 0.82
PVT1-218ENST00000523328 A0A1W2PQD3 144 aa20.15■□□□□ 0.82
PVT1-218ENST00000523328 SSX4O60224 188 aa20.15■□□□□ 0.82
PVT1-218ENST00000523328 FESP07332 822 aa20.15■□□□□ 0.82
PVT1-218ENST00000523328 EIF1P41567 113 aaKnown RBP20.15■□□□□ 0.82
PVT1-218ENST00000523328 PRKAG1P54619 331 aa20.15■□□□□ 0.82
PVT1-218ENST00000523328 DUSP5Q16690 384 aa20.15■□□□□ 0.82
PVT1-218ENST00000523328 IMPG1Q17R60 797 aa20.15■□□□□ 0.82
PVT1-218ENST00000523328 FCRLAQ7L513 359 aa20.15■□□□□ 0.82
PVT1-218ENST00000523328 BHLHA15Q7RTS1 189 aaPredicted RBP20.15■□□□□ 0.82
PVT1-218ENST00000523328 OR10H5Q8NGA6 315 aa20.15■□□□□ 0.82
PVT1-218ENST00000523328 CEP70Q8NHQ1 597 aa20.15■□□□□ 0.82
PVT1-218ENST00000523328 CIDECQ96AQ7 238 aaPredicted RBP20.15■□□□□ 0.82
PVT1-218ENST00000523328 COQ10BQ9H8M1 238 aa20.15■□□□□ 0.82
PVT1-218ENST00000523328 TIGARQ9NQ88 270 aa20.15■□□□□ 0.82
PVT1-218ENST00000523328 B3GALT5Q9Y2C3 310 aa20.15■□□□□ 0.82
PVT1-218ENST00000523328 PDPK1O15530 556 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 RSL1D1O76021 490 aaKnown RBP20.14■□□□□ 0.81
PVT1-218ENST00000523328 PRKD3O94806 890 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 YES1P07947 543 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 GCAP28676 217 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 LCN1P31025 176 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 GPC1P35052 558 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 C21orf58P58505 322 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 KIAA0040Q15053 153 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 NRF1Q16656 503 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 ZNF385BQ569K4 471 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 EXOSC6Q5RKV6 272 aaKnown RBP20.14■□□□□ 0.81
PVT1-218ENST00000523328 ANKRD26P1Q6NSI1 321 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 LCA5Q86VQ0 697 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 NUP43Q8NFH3 380 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 ZNF764Q96H86 408 aaPredicted RBP20.14■□□□□ 0.81
PVT1-218ENST00000523328 RHNO1Q9BSD3 238 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 ING1Q9UK53 422 aaPredicted RBP20.14■□□□□ 0.81
PVT1-218ENST00000523328 CDC42EP3Q9UKI2 254 aa20.14■□□□□ 0.81
PVT1-218ENST00000523328 HPGDP15428 266 aa20.13■□□□□ 0.81
PVT1-218ENST00000523328 PTNP21246 168 aa20.13■□□□□ 0.81
PVT1-218ENST00000523328 ZNF117Q03924 483 aa20.13■□□□□ 0.81
PVT1-218ENST00000523328 TMEM249Q2WGJ8 235 aa20.13■□□□□ 0.81
PVT1-218ENST00000523328 CCNJQ5T5M9 372 aa20.13■□□□□ 0.81
PVT1-218ENST00000523328 Q6ZT83 130 aa20.13■□□□□ 0.81
PVT1-218ENST00000523328 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.13■□□□□ 0.81
PVT1-218ENST00000523328 C16orf58Q96GQ5 468 aa20.13■□□□□ 0.81
PVT1-218ENST00000523328 MS4A4EQ96PG1 132 aa20.13■□□□□ 0.81
PVT1-218ENST00000523328 TSPYL1Q9H0U9 437 aa20.13■□□□□ 0.81
PVT1-218ENST00000523328 FAIMQ9NVQ4 179 aa20.13■□□□□ 0.81
PVT1-218ENST00000523328 CCL27Q9Y4X3 112 aa20.13■□□□□ 0.81
PVT1-218ENST00000523328 A0A087WUV0 522 aaPredicted RBP20.12■□□□□ 0.81
PVT1-218ENST00000523328 NPIPB8E9PQR5 432 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 SCDO00767 359 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 ZNF195O14628 629 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 LYZL6O75951 148 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 ENPP1P22413 925 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 FRKP42685 505 aaPredicted RBP20.12■□□□□ 0.81
PVT1-218ENST00000523328 OR3A2P47893 321 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 CDH11P55287 796 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 PPA1Q15181 289 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 KRTAP24-1Q3LI83 254 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 TMEM176BQ3YBM2 270 aaPredicted RBP20.12■□□□□ 0.81
PVT1-218ENST00000523328 SZRD1Q7Z422 152 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 FBXO27Q8NI29 283 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 ZFP90Q8TF47 636 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 OTUB1Q96FW1 271 aaPredicted RBP20.12■□□□□ 0.81
PVT1-218ENST00000523328 TNFRSF13CQ96RJ3 184 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 PSD2Q9BQI7 771 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 CXorf36Q9H7Y0 433 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 BCO1Q9HAY6 547 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 TNFRSF12AQ9NP84 129 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 NPAP1Q9NZP6 1156 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 PRSS50Q9UI38 385 aa20.12■□□□□ 0.81
PVT1-218ENST00000523328 MALRD1Q5VYJ5 2156 aa20.11■□□□□ 0.81
PVT1-218ENST00000523328 GOLGA8QA0A0J9YX86 632 aa20.11■□□□□ 0.81
PVT1-218ENST00000523328 FAM234BA2RU67 622 aa20.11■□□□□ 0.81
PVT1-218ENST00000523328 GOLGA8OA6NCC3 632 aa20.11■□□□□ 0.81
PVT1-218ENST00000523328 GOLGA8NF8WBI6 632 aa20.11■□□□□ 0.81
PVT1-218ENST00000523328 GOLGA8RI6L899 631 aa20.11■□□□□ 0.81
PVT1-218ENST00000523328 OIP5O43482 229 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms