RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SUPT3HO75486 399 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 AVPP01185 164 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 LTA4HP09960 611 aaKnown RBP12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 SERPINF1P36955 418 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 RFX3P48380 749 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 KHKP50053 298 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 PPOXP50336 477 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 ZNF41P51814 821 aaPredicted RBP12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 RAB10P61026 200 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 GABRA6Q16445 453 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 GRAMD1BQ3KR37 738 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 FBXW9Q5XUX1 488 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 ZNF100Q8IYN0 542 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 TOR1AIP2Q8NFQ8 470 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 STAG3L4Q8TBR4 150 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 MAGOHBQ96A72 148 aaKnown RBP12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 MUS81Q96NY9 551 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 LRRC37BQ96QE4 947 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 RAB1BQ9H0U4 201 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 LPAR2Q9HBW0 351 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 MOKQ9UQ07 419 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 ACOT9Q9Y305 439 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 PCDHB14Q9Y5E9 798 aa12.08□□□□□ -0.48
NKX3-1-202ENST00000523261 LOC105371242A0A075B767 164 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 CCT8L1PA6NM43 557 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 ZNF724A8MTY0 619 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 B9A039 149 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 ALG1L2C9J202 215 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 IGHV3-9P01782 118 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 MSMBP08118 114 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 LINGO3P0C6S8 592 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 IFNGR1P15260 489 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 ELK4P28324 431 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 SLC18A2Q05940 514 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 RASGEF1BQ0VAM2 473 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 GALNT1Q10472 559 aaPredicted RBP12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 TMEM176BQ3YBM2 270 aaPredicted RBP12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 ISCA2Q86U28 154 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 TEX29Q8N6K0 151 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 WDR31Q8NA23 367 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 TSPAN17Q96FV3 270 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 FAIM2Q9BWQ8 316 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 SLITRK2Q9H156 845 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 PLK3Q9H4B4 646 aa12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 DDX28Q9NUL7 540 aaKnown RBP12.07□□□□□ -0.48
NKX3-1-202ENST00000523261 POM121CA8CG34 1229 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 CYTIPO60759 359 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 IGKV1D-16P01601 117 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 MTHFD2P13995 350 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 PSMD4P55036 377 aaKnown RBP12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 FOXG1P55316 489 aaPredicted RBP12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 SLC25A3Q00325 362 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 EFNB3Q15768 340 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 FRG2Q64ET8 278 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 OR7E24Q6IFN5 339 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 FAHD2BQ6P2I3 314 aaPredicted RBP12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 CCDC137Q6PK04 289 aaKnown RBP12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 SPATA19Q7Z5L4 167 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 GALNT5Q7Z7M9 940 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 GATSQ8NAP1 163 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 WDR60Q8WVS4 1066 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 NEU4Q8WWR8 484 aaPredicted RBP12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 FAHD2AQ96GK7 314 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 FRG2BQ96QU4 278 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 IPPKQ9H8X2 491 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 HHATLQ9HCP6 504 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 Q9N2J8 555 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 TAS2R16Q9NYV7 291 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 MCM8Q9UJA3 840 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 MRTO4Q9UKD2 239 aaKnown RBP12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 GUCA1BQ9UMX6 200 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 PPIAL4AQ9Y536 164 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 TEX264Q9Y6I9 313 aa12.06□□□□□ -0.48
NKX3-1-202ENST00000523261 GJE1A6NN92 205 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 COQ9O75208 318 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 BCL10O95999 233 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 PNPP00491 289 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 DDX5P17844 614 aaKnown RBP12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 CXCR5P32302 372 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 EIF1P41567 113 aaKnown RBP12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 RAC3P60763 192 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 FOXF1Q12946 379 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 DLG1Q12959 904 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 GTF2H2Q13888 395 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 ZKSCAN8Q15776 578 aaPredicted RBP12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 ADIPOQQ15848 244 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 GTF2H2CQ6P1K8 395 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 GOLGA7Q7Z5G4 137 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 C1QL2Q7Z5L3 287 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 TMEM139Q8IV31 216 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 UBE2J2Q8N2K1 259 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 BPIFB2Q8N4F0 458 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 CLDND2Q8NHS1 167 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 UBASH3BQ8TF42 649 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 ZFP90Q8TF47 636 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 EXOSC8Q96B26 276 aaKnown RBP12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 SH3YL1Q96HL8 342 aaPredicted RBP12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 CDK15Q96Q40 435 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 CA10Q9NS85 328 aa12.05□□□□□ -0.48
NKX3-1-202ENST00000523261 A0A087WV62 115 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms