RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-231ENST00000521941 SP5Q6BEB4 398 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 TYW3Q6IPR3 259 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 POMZP3Q6PJE2 187 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 CBLN3Q6UW01 205 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 FRRS1Q6ZNA5 592 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 MSANTD1Q6ZTZ1 278 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 LACC1Q8IV20 430 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 FUNDC1Q8IVP5 155 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 GCNT2Q8N0V5 402 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 ZNF619Q8N2I2 560 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 MEIOBQ8N635 442 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 ANKFN1Q8N957 763 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 C9orf106Q8NAJ2 232 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 NAXEQ8NCW5 288 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 ATP6V1C2Q8NEY4 427 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 MIPOL1Q8TD10 442 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 ZFP90Q8TF47 636 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 DOCK7Q96N67 2140 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 PIGQQ9BRB3 760 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 PINK1Q9BXM7 581 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 ZNF350Q9GZX5 532 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 HOXD1Q9GZZ0 328 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 TPT1P8Q9HAU6 139 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 KCNJ16Q9NPI9 418 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 MED4Q9NPJ6 270 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 ZNF337Q9Y3M9 751 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 L3MBTL1Q9Y468 752 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 DTNAQ9Y4J8 743 aa7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 KLF2Q9Y5W3 355 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-231ENST00000521941 SERINC4A6NH21 518 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 CLDN24A6NM45 220 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 HSPB2A8KAH6 182 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 EEF1E1-BLOC1S5C9J1V9 151 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 NPIPB9F8W1W9 429 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 ZNF264O43296 627 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 EEF1E1O43324 174 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 UGT2B17O75795 530 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 EPPINO95925 133 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 CHRM4P08173 479 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 TMIGD3P0DMS9 266 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 COX6B1P14854 86 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 CPN1P15169 458 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 MSX1P28360 303 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 SFTPDP35247 375 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 EIF1AXP47813 144 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 ATP4BP51164 291 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 ZNF136P52737 540 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 SUCLG1P53597 346 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 DSTNP60981 165 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 SF3B4Q15427 424 aaKnown RBP eCLIP7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 TOMM34Q15785 309 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 HSPB2Q16082 182 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 MAPK14Q16539 360 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 SGCBQ16585 318 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 KLHL26Q53HC5 615 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 RPS26P11Q5JNZ5 115 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 PAGE3Q5JUK9 113 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 NSUN5P2Q63ZY6 315 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 HEPHL1Q6MZM0 1159 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 MTERF4Q7Z6M4 381 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 LSRQ86X29 649 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 LIX1LQ8IVB5 337 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 RELL2Q8NC24 303 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 TOR1AIP2Q8NFQ8 470 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 GTF2H4Q92759 462 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 MARVELD3Q96A59 401 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 ZNF845Q96IR2 970 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 NMUR2Q9GZQ4 415 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 PAIP1Q9H074 479 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 RUBCNLQ9H714 662 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 CHST11Q9NPF2 352 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 P2RX2Q9UBL9 471 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 KCNE5Q9UJ90 142 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 TRIM33Q9UPN9 1127 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 MRPS18CQ9Y3D5 142 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 PCDHB14Q9Y5E9 798 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 HCFC1P51610 2035 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 HEATR5AQ86XA9 2040 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 NBPF19A0A087WUL8 3843 aa7.55□□□□□ -1.2
CTNNA1-231ENST00000521941 FLNBO75369 2602 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 MED12LQ86YW9 2145 aa7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 A0A087WZY1 265 aa7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 A0A096LPI6 279 aa7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 MBD3L4A6NDZ8 208 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 MBD3L3A6NE82 208 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 TMEM247A6NEH6 219 aa7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 MBD3L5A6NJ08 208 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 CD8B2A6NJW9 211 aa7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 SLC22A20A6NK97 555 aa7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 CLIC1O00299 241 aa7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 DVL2O14641 736 aa7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 TNFSF11O14788 317 aa7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 BCAS1O75363 584 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 TGM6O95932 706 aa7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 NUDT7P0C024 238 aa7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 ZNF17P17021 662 aa7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 IL11P20809 199 aa7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 ME2P23368 584 aa7.54□□□□□ -1.2
CTNNA1-231ENST00000521941 RYKP34925 604 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms