RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 KLHL2O95198 593 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 STBD1O95210 358 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 TNFAIP8O95379 198 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 TBX6O95947 436 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 CCDC159P0C7I6 412 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 RSPH10BP0C881 870 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 OCM2P0CE71 109 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 OCMP0CE72 109 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 KRT13P13646 458 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 P4HA1P13674 534 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 SRD5A2P31213 254 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 SFNP31947 248 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 RPA3P35244 121 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 COPB2P35606 906 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 COILP38432 576 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 CAPGP40121 348 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 QARSP47897 775 aaKnown RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 KCNJ1P48048 391 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 MARCKSL1P49006 195 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 CLCN4P51793 760 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 PSMC5P62195 406 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 NOP14P78316 857 aaKnown RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 CDKL1Q00532 357 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 IFITM3Q01628 133 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC3A1Q07837 685 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 CDC20Q12834 499 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 CNTN1Q12860 1018 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 KIAA0141Q14154 515 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 C16orf72Q14CZ0 275 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 CYTH1Q15438 398 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 UPP1Q16831 310 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 FUT11Q495W5 492 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZBED5Q49AG3 693 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 KCTD21Q4G0X4 260 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 DNAL1Q4LDG9 190 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 TEX44Q53QW1 395 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 LRRC38Q5VT99 294 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 AGAP6Q5VW22 663 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 LPCAT4Q643R3 524 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 PAQR6Q6TCH4 344 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 NHLRC1Q6VVB1 395 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 ADAMTSL2Q86TH1 951 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC13A5Q86YT5 568 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 PHC2Q8IXK0 858 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 KLHDC8AQ8IYD2 350 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 NATD1Q8N6N6 113 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 BANPQ8N9N5 519 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 BBOF1Q8ND07 529 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 TMEM161BQ8NDZ6 487 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 OR52B6Q8NGF0 335 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF420Q8TAQ5 688 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 SPPL2AQ8TCT8 520 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 MGARPQ8TDB4 240 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC2A14Q8TDB8 520 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 BRSK1Q8TDC3 778 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 ACMSDQ8TDX5 336 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 KRT35Q92764 455 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 PEX13Q92968 403 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 ISOC1Q96CN7 298 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 DUS3LQ96G46 650 aaKnown RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 CDKN2AIPNLQ96HQ2 116 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 BTN2A3PQ96KV6 586 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF597Q96LX8 424 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC29A1Q99808 456 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF577Q9BSK1 485 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 CCM2Q9BSQ5 444 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 TCHPQ9BT92 498 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF350Q9GZX5 532 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 TMEM117Q9H0C3 514 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 TRABDQ9H4I3 376 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 FNDC4Q9H6D8 234 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 RPAP3Q9H6T3 665 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 RPF2Q9H7B2 306 aaKnown RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 LIN28AQ9H9Z2 209 aaKnown RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 C3orf14Q9HBI5 128 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 RAB9BQ9NP90 201 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 UBE2TQ9NPD8 197 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 MRPL17Q9NRX2 175 aaKnown RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 ABCB8Q9NUT2 735 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 ARMC1Q9NVT9 282 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 GID8Q9NWU2 228 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 NKIRAS1Q9NYS0 192 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 C6orf203Q9P0P8 240 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 WRAP73Q9P2S5 460 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 ANKMY1Q9P2S6 941 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 MTRF1LQ9UGC7 380 aaKnown RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 KLK13Q9UKR3 277 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 PSMD13Q9UNM6 376 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 PLCL2Q9UPR0 1127 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 NOSIPQ9Y314 301 aaKnown RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 CPQQ9Y646 472 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 MAD1L1Q9Y6D9 718 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 NAV1Q8NEY1 1877 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 NRXN2Q9P2S2 1712 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 SIPA1L1O43166 1804 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 A0A087X0K7 114 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 A0A0U1RQK1 487 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF320A2RRD8 509 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 ARHGEF35A5YM69 484 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms