RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 GMFBP60983 142 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 SORDQ00796 357 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 CCINQ13939 588 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 MS4A13Q5J8X5 152 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 RPS26P11Q5JNZ5 115 aaPredicted RBP12.66□□□□□ -0.38
PABPC1-208ENST00000519004 PODNL1Q6PEZ8 512 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 BAIAP2L2Q6UXY1 529 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 SSX9Q7RTT3 188 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 LRRC70Q7Z2Q7 622 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 MRGPREQ86SM8 312 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 DCUN1D3Q8IWE4 304 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 SLC43A2Q8N370 569 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 OR5AK3PQ8NH89 298 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 ECHDC3Q96DC8 303 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 EGLN3Q9H6Z9 239 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 KCNK12Q9HB15 430 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 PDFQ9HBH1 243 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 SPG21Q9NZD8 308 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 VPS29Q9UBQ0 182 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 EXOGQ9Y2C4 368 aaKnown RBP12.66□□□□□ -0.38
PABPC1-208ENST00000519004 ZNF106Q9H2Y7 1883 aaKnown RBP12.65□□□□□ -0.38
PABPC1-208ENST00000519004 CCDC88CQ9P219 2028 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 C17orf113A0A1B0GUU1 675 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 SLC31A2O15432 143 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 POP4O95707 220 aaKnown RBP12.65□□□□□ -0.38
PABPC1-208ENST00000519004 SERPIND1P05546 499 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 ATF1P18846 271 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 TBXA2RP21731 343 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 ABCD3P28288 659 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 HOXA6P31267 233 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 POU3F4P49335 361 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 ART1P52961 327 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 PNLIPRP2P54317 469 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 SRSF3P84103 164 aaKnown RBP12.65□□□□□ -0.38
PABPC1-208ENST00000519004 TLE2Q04725 743 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 C3orf33Q6P1S2 294 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 TRIM40Q6P9F5 258 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 ZNF783Q6ZMS7 281 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 GPR142Q7Z601 462 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 SCD5Q86SK9 330 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 ZBTB2Q8N680 514 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 SMAP2Q8WU79 429 aaPredicted RBP12.65□□□□□ -0.38
PABPC1-208ENST00000519004 MGME1Q9BQP7 344 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 ACSS1Q9NUB1 689 aaPredicted RBP12.65□□□□□ -0.38
PABPC1-208ENST00000519004 PLEKHA6Q9Y2H5 1048 aa12.65□□□□□ -0.38
PABPC1-208ENST00000519004 TNS1Q9HBL0 1735 aaKnown RBP12.65□□□□□ -0.38
PABPC1-208ENST00000519004 E7EQ34 232 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 GOSR2O14653 212 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 UBXN7O94888 489 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 ACTL6AO96019 429 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 IGHV2-5P01817 119 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 UCHL1P09936 223 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 OR8U8P0C7N1 319 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 TAS2R60P59551 318 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 BDH1Q02338 343 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 ACSM2AQ08AH3 577 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 MARCH8Q5T0T0 291 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 GPRC6AQ5T6X5 926 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 OLFML2AQ68BL7 652 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 ACSM2BQ68CK6 577 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 ADNP2Q6IQ32 1131 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 TAPT1Q6NXT6 567 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 FAAP20Q6NZ36 180 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 TRIM43Q96BQ3 446 aaPredicted RBP12.64□□□□□ -0.39
PABPC1-208ENST00000519004 ZNF75AQ96N20 296 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 EDEM2Q9BV94 578 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 MRPL17Q9NRX2 175 aaKnown RBP12.64□□□□□ -0.39
PABPC1-208ENST00000519004 ASF1BQ9NVP2 202 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 AFF4Q9UHB7 1163 aaKnown RBP12.64□□□□□ -0.39
PABPC1-208ENST00000519004 GREB1Q4ZG55 1949 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 TRAV14DV4A0A0A6YYC5 116 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 LOC390937A0A1W2PQ73 354 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 OR2T1O43869 369 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 PCDH8O95206 1070 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 SAGP10523 405 aaPredicted RBP12.64□□□□□ -0.39
PABPC1-208ENST00000519004 LHX1P48742 406 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 LUMP51884 338 aaPredicted RBP12.64□□□□□ -0.39
PABPC1-208ENST00000519004 SPCS3P61009 180 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 CACNG1Q06432 222 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 KRT33BQ14525 404 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 NDUFA9Q16795 377 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 CDNFQ49AH0 187 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 FAM182BQ5T319 152 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 NUDT18Q6ZVK8 323 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 LINGO2Q7L985 606 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 LRRC56Q8IYG6 542 aaPredicted RBP12.64□□□□□ -0.39
PABPC1-208ENST00000519004 CLDN19Q8N6F1 224 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 ARL6IP6Q8N6S5 226 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 OR52I2Q8NH67 350 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 ART5Q96L15 291 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 GGACTQ9BVM4 153 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 TRMT61BQ9BVS5 477 aaKnown RBP12.64□□□□□ -0.39
PABPC1-208ENST00000519004 KLHL1Q9NR64 748 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 C2orf42Q9NWW7 574 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 ARL15Q9NXU5 204 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 ASH2LQ9UBL3 628 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 GULP1Q9UBP9 304 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 CKAP5Q14008 2032 aa12.64□□□□□ -0.39
PABPC1-208ENST00000519004 IGLV3-10A0A075B6K4 115 aa12.63□□□□□ -0.39
PABPC1-208ENST00000519004 RFPL4AA6NLU0 287 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms