RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 QRSL1Q9H0R6 528 aaKnown RBP12□□□□□ -0.49
VEGFA-219ENST00000518824 PTGES2Q9H7Z7 377 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 CALHM2Q9HA72 323 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 TCF7L2Q9NQB0 619 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 ZIM2Q9NZV7 527 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 ADGRG4Q8IZF6 3080 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 CLDN24A6NM45 220 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 HSPB2A8KAH6 182 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 LINGO3P0C6S8 592 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 PEPDP12955 493 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 HPGDP15428 266 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 GCKP35557 465 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 POLR2JP52435 117 aaKnown RBP11.99□□□□□ -0.49
VEGFA-219ENST00000518824 MVDP53602 400 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 CHRNEQ04844 493 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 FOXF1Q12946 379 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 RCAN2Q14206 197 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 HSPB2Q16082 182 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 SYPL1Q16563 259 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 BHLHB9Q6PI77 547 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 SLC2A7Q6PXP3 512 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 FRRS1Q6ZNA5 592 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 B4GALNT2Q8NHY0 566 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 ROPN1LQ96C74 230 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 INTS12Q96CB8 462 aaKnown RBP11.99□□□□□ -0.49
VEGFA-219ENST00000518824 ZBTB18Q99592 522 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 RUBCNLQ9H714 662 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 TMEM185BQ9H7F4 350 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 ICAM5Q9UMF0 924 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 DTNAQ9Y4J8 743 aa11.99□□□□□ -0.49
VEGFA-219ENST00000518824 NOTCH2Q04721 2471 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 SERINC4A6NH21 518 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 TGDSO95455 350 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 IL2RAP01589 272 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 CHRM4P08173 479 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 TMIGD3P0DMS9 266 aaPredicted RBP11.98□□□□□ -0.49
VEGFA-219ENST00000518824 KHKP50053 298 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 SF3A3Q12874 501 aaKnown RBP eCLIP11.98□□□□□ -0.499e-12■■■■■ 32
VEGFA-219ENST00000518824 ZNF141Q15928 474 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 BCL2A1Q16548 175 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 CTU2Q2VPK5 515 aaKnown RBP11.98□□□□□ -0.49
VEGFA-219ENST00000518824 GLYR1Q49A26 553 aaPredicted RBP11.98□□□□□ -0.49
VEGFA-219ENST00000518824 C16orf62Q7Z3J2 963 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 GRAMD2AQ8IUY3 354 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 DMRTC2Q8IXT2 367 aaPredicted RBP11.98□□□□□ -0.49
VEGFA-219ENST00000518824 MIER2Q8N344 545 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 GTPBP8Q8N3Z3 284 aaPredicted RBP11.98□□□□□ -0.49
VEGFA-219ENST00000518824 GLB1L3Q8NCI6 653 aaPredicted RBP11.98□□□□□ -0.49
VEGFA-219ENST00000518824 GPR119Q8TDV5 335 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 ZFP90Q8TF47 636 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 ADGRG7Q96K78 797 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 UCN2Q96RP3 112 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 SPOCK3Q9BQ16 436 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 PIGQQ9BRB3 760 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 PINK1Q9BXM7 581 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 NMUR2Q9GZQ4 415 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 SLC52A3Q9NQ40 469 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 SLAMF8Q9P0V8 285 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 L3MBTL1Q9Y468 752 aa11.98□□□□□ -0.49
VEGFA-219ENST00000518824 A0A0J9YW62 118 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 FAM234BA2RU67 622 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 DUXAA6NLW8 204 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 RFXANKO14593 260 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 POLR3GO15318 223 aaPredicted RBP11.97□□□□□ -0.49
VEGFA-219ENST00000518824 KIAA0513O60268 411 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 EDF1O60869 148 aaKnown RBP11.97□□□□□ -0.49
VEGFA-219ENST00000518824 ADAM11O75078 769 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 STX11O75558 287 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 RCBTB2O95199 551 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 H6PDO95479 791 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 IL6P05231 212 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 ETFAP13804 333 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 HOXB9P17482 250 aaPredicted RBP11.97□□□□□ -0.49
VEGFA-219ENST00000518824 CAPN3P20807 821 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 CTSSP25774 331 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 SLC6A8P48029 635 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 P2RX1P51575 399 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 SLC25A35Q3KQZ1 300 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 GPAT3Q53EU6 434 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 PAGE3Q5JUK9 113 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 MISPQ8IVT2 679 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 FBXO27Q8NI29 283 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 FNDC9Q8TBE3 224 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 GTF2H4Q92759 462 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 WNT2BQ93097 391 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 CCDC28BQ9BUN5 200 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 HOXD1Q9GZZ0 328 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 PAIP1Q9H074 479 aaKnown RBP11.97□□□□□ -0.49
VEGFA-219ENST00000518824 SAP130Q9H0E3 1048 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 SLC38A1Q9H2H9 487 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 EXD2Q9NVH0 621 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 DCTN4Q9UJW0 460 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 WDR45Q9Y484 360 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 DCHS2Q6V1P9 2916 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 ABCA12Q86UK0 2595 aa11.97□□□□□ -0.49
VEGFA-219ENST00000518824 A0A087WZY1 265 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.96□□□□□ -0.49
VEGFA-219ENST00000518824 GTPBP1O00178 669 aaKnown RBP11.96□□□□□ -0.49
VEGFA-219ENST00000518824 EIF1AYO14602 144 aaKnown RBP11.96□□□□□ -0.49
VEGFA-219ENST00000518824 TNFSF11O14788 317 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms