RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 ZNF426Q9BUY5 554 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 TRIM2Q9C040 744 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 OR8D2Q9GZM6 311 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NXF5Q9H1B4 397 aaKnown RBP5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CXorf56Q9H5V9 222 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 POLR1BQ9H9Y6 1135 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 SLC25A19Q9HC21 320 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 APMAPQ9HDC9 416 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CCNB1IP1Q9NPC3 277 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 FBXO8Q9NRD0 319 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CTPS2Q9NRF8 586 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 UBQLN4Q9NRR5 601 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 RXFP3Q9NSD7 469 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 C14orf105Q9NVL8 296 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 DNAJB12Q9NXW2 375 aaKnown RBP5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 IL20Q9NYY1 176 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 FLRT3Q9NZU0 649 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ERVK-18Q9QC07 812 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 TESQ9UGI8 421 aaKnown RBP5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 SLC7A7Q9UM01 511 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 OR10H1Q9Y4A9 318 aa5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 RIF1Q5UIP0 2472 aaKnown RBP5□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CPAMD8Q8IZJ3 1885 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 C2orf92A0A1B0GVN3 265 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 A0A1B0GWA3 101 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 SAGE2PA6NJ88 616 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CLCA1A8K7I4 914 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 IDSB3KWA1 339 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 B4E171 279 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 MEN1O00255 615 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 FLRT2O43155 660 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 GALR2O43603 387 aaPredicted RBP4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 RGS10O43665 173 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CHP2O43745 196 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 PRKNO60260 465 aaPredicted RBP4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 FAM20BO75063 409 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CBFA2T3O75081 653 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ALOX12BO75342 701 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 PTP4A3O75365 173 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 UTS2O95399 124 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 SOX14O95416 240 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CSTAP01040 98 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 HEXBP07686 556 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NGFRP08138 427 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ZNF806P0C7X5 589 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CCL4P13236 92 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CD59P13987 128 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 DCKP27707 260 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 POU1F1P28069 291 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CCKBRP32239 447 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 TSPAN7P41732 249 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 RBM34P42696 430 aaKnown RBP4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 RFX3P48380 749 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NUBP1P53384 320 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 EMP2P54851 167 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CTBP2P56545 445 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 FOXL2P58012 376 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 PSPHP78330 225 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 OCA2Q04671 838 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 IRF3Q14653 427 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 GINS1Q14691 196 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NEDD8Q15843 81 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NNATQ16517 81 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 OCLNQ16625 522 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 SYT6Q5T7P8 510 aaPredicted RBP4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 TMEM205Q6UW68 189 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 APOOLQ6UXV4 268 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 LANCL3Q6ZV70 420 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 PTCHD4Q6ZW05 846 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 TMPRSS11FQ6ZWK6 438 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 RRM2BQ7LG56 351 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ZNF550Q7Z398 422 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 SLCO6A1Q86UG4 719 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 MEX3DQ86XN8 651 aaKnown RBP4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 P3H2Q8IVL5 708 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 NRMQ8IXM6 262 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ZNF440Q8IYI8 595 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 PRSS58Q8IYP2 241 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CLDN22Q8N7P3 220 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ZNF527Q8NB42 609 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 APCDD1LQ8NCL9 501 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ZNF540Q8NDQ6 660 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 OR8J1Q8NGP2 316 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ZNF420Q8TAQ5 688 aaPredicted RBP4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 BRIX1Q8TDN6 353 aaKnown RBP4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 RHBDD1Q8TEB9 315 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 FAR1Q8WVX9 515 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 TMEM239Q8WW34 195 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 ATOH1Q92858 354 aaPredicted RBP4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 OSTF1Q92882 214 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 TP53INP1Q96A56 240 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 EFHD2Q96C19 240 aaPredicted RBP4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 CLIP3Q96DZ5 547 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 HSPBAP1Q96EW2 488 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 FAM46AQ96IP4 442 aaKnown RBP4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 MPP4Q96JB8 637 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 SPSB2Q99619 263 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 WDR77Q9BQA1 342 aaPredicted RBP4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 RHNO1Q9BSD3 238 aa4.99□□□□□ -1.61
SCARNA20.4-201ENST00000516969 POLDIP3Q9BY77 421 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms