RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 POU2F1P14859 743 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 NAGAP17050 411 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ENDOUP21128 410 aaKnown RBP7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CSRP1P21291 193 aaKnown RBP7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 MMP11P24347 488 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 HTR2AP28223 471 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ADH7P40394 386 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CLK3P49761 638 aaKnown RBP7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 PLAURQ03405 335 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TARDBPQ13148 414 aaKnown RBP eCLIP7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 EFR3AQ14156 821 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 EXT1Q16394 746 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 BTBD16Q32M84 506 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ZNF691Q5VV52 312 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 PGBD2Q6P3X8 592 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TMEM154Q6P9G4 183 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TTC33Q6PID6 262 aaPredicted RBP7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 KLHL17Q6TDP4 642 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 APLFQ8IW19 511 aaPredicted RBP7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CACTIN-AS1Q8N1I8 211 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ZNF786Q8N393 782 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 PARP8Q8N3A8 854 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 GATSQ8NAP1 163 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 FAM71CQ8NEG0 241 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 PIGXQ8TBF5 258 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RNF217Q8TC41 542 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 THAP3Q8WTV1 239 aaPredicted RBP7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 DGCR6LQ9BY27 220 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 DEFB126Q9BYW3 111 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 UCK2Q9BZX2 261 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 B3GNT4Q9C0J1 378 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 POLR1BQ9H9Y6 1135 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 LIN28AQ9H9Z2 209 aaKnown RBP7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 KRCC1Q9NPI7 259 aaPredicted RBP7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 EXOSC3Q9NQT5 275 aaKnown RBP7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 FOXJ2Q9P0K8 574 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RPS6KB2Q9UBS0 482 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TCFL5Q9UL49 500 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 SLC7A7Q9UM01 511 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 FARSAQ9Y285 508 aaKnown RBP7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 GMPPBQ9Y5P6 360 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 NPFFR2Q9Y5X5 522 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 HS3ST3B1Q9Y662 390 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 HSPE1-MOB4S4R3N1 261 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CUL9Q8IWT3 2517 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 NSG1A0A0A6YYJ2 146 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 A0A1B0GWA3 101 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 A0A1W2PQ72 361 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 A0A1W2PQD3 144 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 C21orf140B9A014 251 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ALG1L2C9J202 215 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 PROB1E7EW31 1015 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 WWP2O00308 870 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ZNF264O43296 627 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 NDUFB5O43674 189 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CHP2O43745 196 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RAD1O60671 282 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 THY1P04216 161 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 LINGO3P0C6S8 592 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 OSMP13725 252 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 GSTM3P21266 225 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 EPHA2P29317 976 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 OTX2P32243 289 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 EVI2BP34910 448 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RYKP34925 604 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 DLSTP36957 453 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ACAA2P42765 397 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TMED10P49755 219 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CCR4P51679 360 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 NUP107P57740 925 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ISL1P61371 349 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 COPZ1P61923 177 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RPS18P62269 152 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ESRRGP62508 458 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RPP38P78345 283 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 IL5RAQ01344 420 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 COX10Q12887 443 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 DNASE1L3Q13609 305 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RAPSNQ13702 412 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 BLMHQ13867 455 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 NDUFAF6Q330K2 333 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 FNDC7Q5VTL7 733 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 PLAG1Q6DJT9 500 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 DESI1Q6ICB0 168 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 C1orf94Q6P1W5 598 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ULK3Q6PHR2 472 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 KIRREL2Q6UWL6 708 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ISLR2Q6UXK2 745 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 C16orf47Q6ZP98 133 aaPredicted RBP7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 MBOAT2Q6ZWT7 520 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 NDUFAF7Q7L592 441 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 NUP54Q7Z3B4 507 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 PPP1R32Q7Z5V6 425 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ZER1Q7Z7L7 766 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TMPRSS12Q86WS5 348 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 NKAIN4Q8IVV8 208 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RNF113BQ8IZP6 322 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 NLGN4XQ8N0W4 816 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CADM2Q8N3J6 435 aa7.01□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TMCO5AQ8N6Q1 288 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms