RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 BCL2A1Q16548 175 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 TMEM44Q2T9K0 475 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 PLPPR5Q32ZL2 321 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 COX20Q5RI15 118 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 SAXO2Q658L1 398 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 DNAJC14Q6Y2X3 702 aaPredicted RBP10.35□□□□□ -0.75
VCAN-212ENST00000515397 HDXQ7Z353 690 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 RNF130Q86XS8 419 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 CNEP1R1Q8N9A8 125 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 FNDC9Q8TBE3 224 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 RAB3IL1Q8TBN0 382 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 PIWIL2Q8TC59 973 aaKnown RBP10.35□□□□□ -0.75
VCAN-212ENST00000515397 NRGNQ92686 78 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 MOAP1Q96BY2 351 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 OR52E6Q96RD3 313 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 SH3GL2Q99962 352 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 ZNF559Q9BR84 538 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 SLC35A5Q9BS91 424 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 CRIM1Q9NZV1 1036 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 L3MBTL1Q9Y468 752 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 USH1CQ9Y6N9 552 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 ANKHD1Q8IWZ3 2542 aaKnown RBP10.35□□□□□ -0.75
VCAN-212ENST00000515397 ABCA4P78363 2273 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 A0A1W2PNV4 684 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 CLDN24A6NM45 220 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 NPIPB9F8W1W9 429 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 SLCO1B7G3V0H7 640 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 TNFSF11O14788 317 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 UBDO15205 165 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 CXCL13O43927 109 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 SMNDC1O75940 238 aaKnown RBP eCLIP10.34□□□□□ -0.75
VCAN-212ENST00000515397 AQP8O94778 261 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 PGRP06401 933 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 KRT16P08779 473 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 H2AFXP16104 143 aaPredicted RBP10.34□□□□□ -0.75
VCAN-212ENST00000515397 SSTR2P30874 369 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 SFTPDP35247 375 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 OPRM1P35372 400 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 KIR2DL3P43628 341 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 EIF1AXP47813 144 aaKnown RBP10.34□□□□□ -0.75
VCAN-212ENST00000515397 ASCL1P50553 236 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 CCR4P51679 360 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 FUT5Q11128 374 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 FOXF1Q12946 379 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 GANABQ14697 944 aaKnown RBP10.34□□□□□ -0.75
VCAN-212ENST00000515397 PON3Q15166 354 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 SGCBQ16585 318 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 GTDC1Q4AE62 458 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 VWA1Q6PCB0 445 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 BHLHB9Q6PI77 547 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 EPGNQ6UW88 154 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 C16orf62Q7Z3J2 963 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 BTLAQ7Z6A9 289 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 GGNQ86UU5 652 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 KIRREL3Q8IZU9 778 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 TMCO5AQ8N6Q1 288 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 FBXO27Q8NI29 283 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 LRRC8CQ8TDW0 803 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 ACTRT2Q8TDY3 377 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 RNASE6Q93091 150 aaKnown RBP10.34□□□□□ -0.75
VCAN-212ENST00000515397 VPS33AQ96AX1 596 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 NEURL3Q96EH8 262 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 MAELQ96JY0 434 aaKnown RBP10.34□□□□□ -0.75
VCAN-212ENST00000515397 CCDC115Q96NT0 180 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 PANX1Q96RD7 426 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 ZBTB18Q99592 522 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 TM9SF2Q99805 663 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 EBF4Q9BQW3 602 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 QRSL1Q9H0R6 528 aaKnown RBP10.34□□□□□ -0.75
VCAN-212ENST00000515397 MCCC2Q9HCC0 563 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 DTNAQ9Y4J8 743 aa10.34□□□□□ -0.75
VCAN-212ENST00000515397 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 A0A0J9YW62 118 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 A0A1W2PQD3 144 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 SERINC4A6NH21 518 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 DUXAA6NLW8 204 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 H3BNH8 94 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 HMGN4O00479 90 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 KLF11O14901 512 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 STX11O75558 287 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 UGT2B17O75795 530 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 TNFSF13O75888 250 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 LINGO3P0C6S8 592 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 UBTFL6P0CB48 400 aaPredicted RBP10.33□□□□□ -0.76
VCAN-212ENST00000515397 IDO1P14902 403 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 PSMA4P25789 261 aaKnown RBP10.33□□□□□ -0.76
VCAN-212ENST00000515397 LCN1P31025 176 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 IDH3AP50213 366 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 CHRNEQ04844 493 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 SF3A3Q12874 501 aaKnown RBP eCLIP10.33□□□□□ -0.76
VCAN-212ENST00000515397 SYPL1Q16563 259 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 ARHGAP11BQ3KRB8 267 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 GLYR1Q49A26 553 aaPredicted RBP10.33□□□□□ -0.76
VCAN-212ENST00000515397 PDCD4Q53EL6 469 aaKnown RBP10.33□□□□□ -0.76
VCAN-212ENST00000515397 GPAT3Q53EU6 434 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 TMEM200AQ86VY9 491 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 LRRC34Q8IZ02 419 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 GTPBP8Q8N3Z3 284 aaPredicted RBP10.33□□□□□ -0.76
VCAN-212ENST00000515397 ANKFN1Q8N957 763 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 ZNF527Q8NB42 609 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms