RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 ANXA8L1Q5VT79 327 aa11.96□□□□□ -0.49
RNF4-215ENST00000511843 SAXO2Q658L1 398 aa11.96□□□□□ -0.49
RNF4-215ENST00000511843 VWA1Q6PCB0 445 aa11.96□□□□□ -0.49
RNF4-215ENST00000511843 BHLHB9Q6PI77 547 aa11.96□□□□□ -0.49
RNF4-215ENST00000511843 DNAJC14Q6Y2X3 702 aaPredicted RBP11.96□□□□□ -0.49
RNF4-215ENST00000511843 TMEM200AQ86VY9 491 aa11.96□□□□□ -0.49
RNF4-215ENST00000511843 LRRC34Q8IZ02 419 aa11.96□□□□□ -0.49
RNF4-215ENST00000511843 NRGNQ92686 78 aa11.96□□□□□ -0.49
RNF4-215ENST00000511843 ATP6V1G3Q96LB4 118 aa11.96□□□□□ -0.49
RNF4-215ENST00000511843 SLCO1B3Q9NPD5 702 aa11.96□□□□□ -0.49
RNF4-215ENST00000511843 JKAMPQ9P055 326 aa11.96□□□□□ -0.49
RNF4-215ENST00000511843 MKLN1Q9UL63 735 aa11.96□□□□□ -0.49
RNF4-215ENST00000511843 ANKRD17O75179 2603 aaKnown RBP11.96□□□□□ -0.5
RNF4-215ENST00000511843 OTOGQ6ZRI0 2925 aa11.96□□□□□ -0.5
RNF4-215ENST00000511843 CSMD1Q96PZ7 3565 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 A0A1W2PNV4 684 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 GTPBP1O00178 669 aaKnown RBP11.95□□□□□ -0.5
RNF4-215ENST00000511843 DIAPH2O60879 1101 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 CYP7B1O75881 506 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 TNFSF13O75888 250 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 SMNDC1O75940 238 aaKnown RBP eCLIP11.95□□□□□ -0.5
RNF4-215ENST00000511843 AQP8O94778 261 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 NUDT14O95848 222 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 IL18BPO95998 194 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 LINGO3P0C6S8 592 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 PSMA4P25789 261 aaKnown RBP11.95□□□□□ -0.5
RNF4-215ENST00000511843 EIF1AXP47813 144 aaKnown RBP11.95□□□□□ -0.5
RNF4-215ENST00000511843 CCR4P51679 360 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 FBXL19-AS1Q494R0 122 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 C16orf62Q7Z3J2 963 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 GTPBP8Q8N3Z3 284 aaPredicted RBP11.95□□□□□ -0.5
RNF4-215ENST00000511843 TMCO5AQ8N6Q1 288 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 CNEP1R1Q8N9A8 125 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 ZNF527Q8NB42 609 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 CHDHQ8NE62 594 aaPredicted RBP11.95□□□□□ -0.5
RNF4-215ENST00000511843 VPS37AQ8NEZ2 397 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 OR9I1Q8NGQ6 314 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 GOT1L1Q8NHS2 421 aaPredicted RBP11.95□□□□□ -0.5
RNF4-215ENST00000511843 LINC01560Q8TB33 94 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 PIWIL2Q8TC59 973 aaKnown RBP11.95□□□□□ -0.5
RNF4-215ENST00000511843 PNPT1Q8TCS8 783 aaKnown RBP11.95□□□□□ -0.5
RNF4-215ENST00000511843 XAGE5Q8WWM1 108 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 MAELQ96JY0 434 aaKnown RBP11.95□□□□□ -0.5
RNF4-215ENST00000511843 CCDC115Q96NT0 180 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 OR52E6Q96RD3 313 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 SFXN3Q9BWM7 321 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 RBM24Q9BX46 236 aaKnown RBP11.95□□□□□ -0.5
RNF4-215ENST00000511843 SLC6A13Q9NSD5 602 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 GALNT8Q9NY28 637 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 KCNN3Q9UGI6 736 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 ITGB1BP2Q9UKP3 347 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 ICAM5Q9UMF0 924 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 DTNAQ9Y4J8 743 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 AP4B1Q9Y6B7 739 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 USH1CQ9Y6N9 552 aa11.95□□□□□ -0.5
RNF4-215ENST00000511843 MYO9AB2RTY4 2548 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 A0A087WZY1 265 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 A0A0J9YW62 118 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 PRAMEF27A3QJZ7 478 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 CCDC154A6NI56 674 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 SLCO1B7G3V0H7 640 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 LINC01387J3KSC0 135 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 TNFSF11O14788 317 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 KLF11O14901 512 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 EFNA2O43921 213 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 CXCL13O43927 109 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 BCAS1O75363 584 aaPredicted RBP11.94□□□□□ -0.5
RNF4-215ENST00000511843 STX11O75558 287 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 PGRP06401 933 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 ZNF17P17021 662 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 SFTPDP35247 375 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 CPOXP36551 454 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 CPA2P48052 419 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 P2RX1P51575 399 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 MAPK14Q16539 360 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 SGCBQ16585 318 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 DPY19L1Q2PZI1 675 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 CTU2Q2VPK5 515 aaKnown RBP11.94□□□□□ -0.5
RNF4-215ENST00000511843 ARHGAP11BQ3KRB8 267 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 COX20Q5RI15 118 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 HEPHL1Q6MZM0 1159 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 ZNF621Q6ZSS3 439 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 MTERF4Q7Z6M4 381 aaKnown RBP11.94□□□□□ -0.5
RNF4-215ENST00000511843 RNF130Q86XS8 419 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 MISPQ8IVT2 679 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 METTL25Q8N6Q8 603 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 ATP6V1C2Q8NEY4 427 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 OR10D3Q8NH80 312 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 FBXO27Q8NI29 283 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 MIPOL1Q8TD10 442 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 ACTRT2Q8TDY3 377 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 ZBTB8AQ96BR9 441 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 ROPN1LQ96C74 230 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 NEURL3Q96EH8 262 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 ZFP3Q96NJ6 502 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 PANX1Q96RD7 426 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 ZBTB18Q99592 522 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 GPATCH1Q9BRR8 931 aaKnown RBP11.94□□□□□ -0.5
RNF4-215ENST00000511843 ZNF350Q9GZX5 532 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms