RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ACADVLP49748 655 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 SLC26A2P50443 739 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 PLA2G16P53816 162 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 MRPS11P82912 194 aaKnown RBP2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 EWSR1Q01844 656 aaKnown RBP eCLIP2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 ELP6Q0PNE2 266 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 SNTB2Q13425 540 aaKnown RBP2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 KRT71Q3SY84 523 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 SLC36A3Q495N2 470 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 RSBN1Q5VWQ0 802 aaPredicted RBP2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 WSCD1Q658N2 575 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 KCNIP4Q6PIL6 250 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 FRA10AC1Q70Z53 315 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 TRPM8Q7Z2W7 1104 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 C11orf53Q8IXP5 236 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 UBQLNLQ8IYU4 475 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 LINC01561Q8N1V8 128 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 STXBP6Q8NFX7 210 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 AENQ8WTP8 325 aaKnown RBP2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 DTNBP1Q96EV8 351 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 MAGEB18Q96M61 343 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 CNPY3Q9BT09 278 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 Q9H3A6 140 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 PTGES2Q9H7Z7 377 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 NANSQ9NR45 359 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 SPRR3Q9UBC9 169 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 CHRNA9Q9UGM1 479 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 SNX6Q9UNH7 406 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 GSTK1Q9Y2Q3 226 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 OR10H1Q9Y4A9 318 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 OARD1Q9Y530 152 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 ALG6Q9Y672 507 aa2.5□□□□□ -2.01
TRAPPC11-207ENST00000511409 ESYT2A0FGR8 921 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 TMEM110-MUSTN1A8MSY1 372 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 E7ENQ6 273 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 PPIAL4DF5H284 164 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 TBL1XO60907 577 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 CABYRO75952 493 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 NEBLO76041 1014 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 B3GAT3O94766 335 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 OR8U8P0C7N1 319 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 PSMB1P20618 241 aaKnown RBP2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 DRD5P21918 477 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 PSMA5P28066 241 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 SOX6P35712 828 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 DIO3P55073 304 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 CNTN2Q02246 1040 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 CUL1Q13616 776 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 LAGE3Q14657 143 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 KYAT1Q16773 422 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 TATDN3Q17R31 274 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 ISXQ2M1V0 245 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 NADK2Q4G0N4 442 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 SBK1Q52WX2 424 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 PRR30Q53SZ7 412 aaPredicted RBP2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 RABGAP1LQ5R372 815 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 METTL11BQ5VVY1 283 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 FAHD2BQ6P2I3 314 aaPredicted RBP2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 C16orf62Q7Z3J2 963 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 TMEM110Q86TL2 294 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 ZDHHC21Q8IVQ6 265 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 PRR22Q8IZ63 422 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 LRRC43Q8N309 656 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 TEX9Q8N6V9 391 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 OR10H4Q8NGA5 316 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 RAET1EQ8TD07 263 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 ANKRD49Q8WVL7 239 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 CTNNBL1Q8WYA6 563 aaPredicted RBP2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 FAHD2AQ96GK7 314 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 TTC25Q96NG3 672 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 CYP2S1Q96SQ9 504 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 SLC6A7Q99884 636 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 C19orf24Q9BVV8 132 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 YTHDF1Q9BYJ9 559 aaKnown RBP2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 NXF5Q9H1B4 397 aaKnown RBP2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 ISG20L2Q9H9L3 353 aaKnown RBP2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 MEAF6Q9HAF1 191 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 FANCFQ9NPI8 374 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 AATFQ9NY61 560 aaKnown RBP eCLIP2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 OR1A1Q9P1Q5 309 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 GNG12Q9UBI6 72 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 WDR45Q9Y484 360 aa2.49□□□□□ -2.01
TRAPPC11-207ENST00000511409 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 ZFP92A6NM28 416 aa2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 B4DXG7 233 aa2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 KIF2AO00139 706 aaPredicted RBP2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 CDX4O14627 284 aaPredicted RBP2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 XPO1O14980 1071 aaKnown RBP2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 ZSCAN12O43309 604 aa2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 BCAS1O75363 584 aaPredicted RBP2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 KIAA0754O94854 1291 aa2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 LRATO95237 230 aa2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 UGT2B4P06133 528 aa2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 STSP08842 583 aa2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 P0C879 139 aa2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 RPA2P15927 270 aa2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 ZP3P21754 424 aa2.48□□□□□ -2.01
TRAPPC11-207ENST00000511409 HNRNPA2B1P22626 353 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms