RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-231	ENST00000510245	OSR1	Q8TAX0	266 aa	Predicted RBP	6.55	□□□□□ -1.36
CAST-231	ENST00000510245	ATL1	Q8WXF7	558 aa		6.55	□□□□□ -1.36
CAST-231	ENST00000510245	SMPDL3A	Q92484	453 aa		6.55	□□□□□ -1.36
CAST-231	ENST00000510245	SPACA9	Q96E40	222 aa	Predicted RBP	6.55	□□□□□ -1.36
CAST-231	ENST00000510245	TIGD1	Q96MW7	591 aa		6.55	□□□□□ -1.36
CAST-231	ENST00000510245	SLC6A7	Q99884	636 aa		6.55	□□□□□ -1.36
CAST-231	ENST00000510245	RHBG	Q9H310	441 aa		6.55	□□□□□ -1.36
CAST-231	ENST00000510245	CBLN4	Q9NTU7	201 aa		6.55	□□□□□ -1.36
CAST-231	ENST00000510245	ABCF3	Q9NUQ8	709 aa		6.55	□□□□□ -1.36
CAST-231	ENST00000510245	MAN1B1	Q9UKM7	699 aa		6.55	□□□□□ -1.36
CAST-231	ENST00000510245	C15orf41	Q9Y2V0	281 aa		6.55	□□□□□ -1.36
CAST-231	ENST00000510245	PPIAL4A	Q9Y536	164 aa		6.55	□□□□□ -1.36
CAST-231	ENST00000510245	FKBP7	Q9Y680	259 aa		6.55	□□□□□ -1.36
CAST-231	ENST00000510245	TRBV5-4	A0A0C4DH59	114 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	SLC22A20	A6NK97	555 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	PLOD2	O00469	737 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	TRIM3	O75382	744 aa	Predicted RBP	6.54	□□□□□ -1.36
CAST-231	ENST00000510245	C1orf105	O95561	183 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	CGA	P01215	116 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	APOA4	P06727	396 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	SLC35G6	P0C7Q6	338 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	PRSS56	P0CW18	603 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	PPP2R1B	P30154	601 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	CCR7	P32248	378 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	ARHGAP25	P42331	645 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	CCR9	P51686	369 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	CDH15	P55291	814 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	TUBA4A	P68366	448 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	PRDX1	Q06830	199 aa	Known RBP	6.54	□□□□□ -1.36
CAST-231	ENST00000510245	BSPH1	Q075Z2	132 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	SLC10A2	Q12908	348 aa	Predicted RBP	6.54	□□□□□ -1.36
CAST-231	ENST00000510245	DOC2A	Q14183	400 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	DEFB134	Q4QY38	66 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	RUSC1-AS1	Q66K80	236 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	C11orf71	Q6IPW1	123 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	SBSN	Q6UWP8	590 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	ZNF66	Q6ZN08	573 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	YRDC	Q86U90	279 aa	Known RBP	6.54	□□□□□ -1.36
CAST-231	ENST00000510245	ARMC8	Q8IUR7	673 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	UEVLD	Q8IX04	471 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	FBXL14	Q8N1E6	418 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	TEX29	Q8N6K0	151 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	ZNF540	Q8NDQ6	660 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	SETD9	Q8NE22	299 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	OR10G3	Q8NGC4	313 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	MAGEC3	Q8TD91	643 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	CNOT9	Q92600	299 aa	Known RBP	6.54	□□□□□ -1.36
CAST-231	ENST00000510245	RHBDF1	Q96CC6	855 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	FOXN4	Q96NZ1	517 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	TSSK1B	Q9BXA7	367 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	BPESC1	Q9GZL8	116 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	UBQLN3	Q9H347	655 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	GOLPH3L	Q9H4A5	285 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	PROK2	Q9HC23	129 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	SLC25A10	Q9UBX3	287 aa	Predicted RBP	6.54	□□□□□ -1.36
CAST-231	ENST00000510245	GRIP1	Q9Y3R0	1128 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	SLC22A7	Q9Y694	548 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	CLCA3P	Q9Y6N3	262 aa		6.54	□□□□□ -1.36
CAST-231	ENST00000510245	RYR2	Q92736	4967 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245		A0A0A0MQY5	61 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	LOC390937	A0A1W2PQ73	354 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	SYCE3	A1L190	88 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	GALR3	O60755	368 aa	Predicted RBP	6.53	□□□□□ -1.36
CAST-231	ENST00000510245	RAMP1	O60894	148 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	GUCY1B2	O75343	617 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	PROP1	O75360	226 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	IFNA16	P05015	189 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	FCGR2A	P12318	317 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	RNH1	P13489	461 aa	Known RBP	6.53	□□□□□ -1.36
CAST-231	ENST00000510245	IL2RG	P31785	369 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	TTK	P33981	857 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	GJC1	P36383	396 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	SSR1	P43307	286 aa	Known RBP	6.53	□□□□□ -1.36
CAST-231	ENST00000510245	ZNF140	P52738	457 aa	Predicted RBP	6.53	□□□□□ -1.36
CAST-231	ENST00000510245	ABAT	P80404	500 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	SRSF4	Q08170	494 aa	Known RBP	6.53	□□□□□ -1.36
CAST-231	ENST00000510245	ASPH	Q12797	758 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	DPYSL3	Q14195	570 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	SLC18A3	Q16572	532 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	NIPAL1	Q6NVV3	410 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	UGT2A3	Q6UWM9	527 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	PACS1	Q6VY07	963 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	ASPG	Q86U10	573 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	KLB	Q86Z14	1044 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	DND1	Q8IYX4	353 aa	Known RBP	6.53	□□□□□ -1.36
CAST-231	ENST00000510245	PLD5	Q8N7P1	536 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	TC2N	Q8N9U0	490 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	FAM83F	Q8NEG4	500 aa	Predicted RBP	6.53	□□□□□ -1.36
CAST-231	ENST00000510245	SLC13A3	Q8WWT9	602 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	RAB40A	Q8WXH6	277 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	FOPNL	Q96NB1	174 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	PRAP1	Q96NZ9	151 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	NPL	Q9BXD5	320 aa	Predicted RBP	6.53	□□□□□ -1.36
CAST-231	ENST00000510245	OR8D2	Q9GZM6	311 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	KLHL13	Q9P2N7	655 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	HEY2	Q9UBP5	337 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	HOOK1	Q9UJC3	728 aa	Known RBP	6.53	□□□□□ -1.36
CAST-231	ENST00000510245	PTBP2	Q9UKA9	531 aa	Known RBP	6.53	□□□□□ -1.36
CAST-231	ENST00000510245	DLGAP4	Q9Y2H0	992 aa		6.53	□□□□□ -1.36
CAST-231	ENST00000510245	MMACHC	Q9Y4U1	282 aa		6.53	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms