RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TCP10LQ8TDR4 215 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 ADGRG7Q96K78 797 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 STACQ99469 402 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 PIP5K1AQ99755 562 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 C1orf50Q9BV19 199 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 ACTRT3Q9BYD9 372 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 HOXD1Q9GZZ0 328 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 PIGUQ9H490 435 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 TIGARQ9NQ88 270 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 DUSP22Q9NRW4 184 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 GLRX2Q9NS18 164 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 SIRT3Q9NTG7 399 aaPredicted RBP13.78□□□□□ -0.2
TPM3-219ENST00000509409 ATAD3AQ9NVI7 634 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 MKS1Q9NXB0 559 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 NIPBLQ6KC79 2804 aaeCLIP13.77□□□□□ -0.26e-7■■■□□ 15
TPM3-219ENST00000509409 C7orf72A4D263 438 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 CFLARO15519 480 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 LYPLA1O75608 230 aaPredicted RBP13.77□□□□□ -0.21
TPM3-219ENST00000509409 PPP3CBP16298 524 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 IL11P20809 199 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 EIF1P41567 113 aaKnown RBP13.77□□□□□ -0.21
TPM3-219ENST00000509409 LTBQ06643 244 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 CD226Q15762 336 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 CTU2Q2VPK5 515 aaKnown RBP13.77□□□□□ -0.21
TPM3-219ENST00000509409 ALKBH2Q6NS38 261 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 CDC73Q6P1J9 531 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 BEND4Q6ZU67 534 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 C22orf34Q6ZV56 151 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 LRRC75A-AS1Q8N1F1 130 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 NATD1Q8N6N6 113 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 ATP6V1C2Q8NEY4 427 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 OR56A1Q8NGH5 318 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 ROBO4Q8WZ75 1007 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 CAVIN3Q969G5 261 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 PERPQ96FX8 193 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 KLHL15Q96M94 604 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 HS3ST6Q96QI5 342 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 C12orf49Q9H741 205 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 ZDHHC2Q9UIJ5 367 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 CARD8Q9Y2G2 431 aa13.77□□□□□ -0.21
TPM3-219ENST00000509409 NPIPA5A0A0B4J1W7 369 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 NPIPA7E9PJI5 369 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 SKAP2O75563 359 aaPredicted RBP13.76□□□□□ -0.21
TPM3-219ENST00000509409 SOX30O94993 753 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 C6orf47O95873 294 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 KRT16P08779 473 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 PABPC4LP0CB38 370 aaKnown RBP13.76□□□□□ -0.21
TPM3-219ENST00000509409 NPIPA8P0DM63 369 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 PSMA4P25789 261 aaKnown RBP13.76□□□□□ -0.21
TPM3-219ENST00000509409 PTGR1Q14914 329 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 BEX5Q5H9J7 111 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 C6orf136Q5SQH8 315 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 STAC2Q6ZMT1 411 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 C20orf204Q6ZNR8 217 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 MTERF4Q7Z6M4 381 aaKnown RBP13.76□□□□□ -0.21
TPM3-219ENST00000509409 WFDC8Q8IUA0 241 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 KRTAP1-3Q8IUG1 177 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 ZNF614Q8N883 585 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 RFWD2Q8NHY2 731 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 PPP1R14CQ8TAE6 165 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 NUDT8Q8WV74 236 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 TUBGCP3Q96CW5 907 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 C3orf30Q96M34 536 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 KLHDC3Q9BQ90 382 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 CXorf36Q9H7Y0 433 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 KCNE3Q9Y6H6 103 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 PCNX3Q9H6A9 2034 aa13.76□□□□□ -0.21
TPM3-219ENST00000509409 GJE1A6NN92 205 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 ZNF195O14628 629 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 THBDP07204 575 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 TUBBP07437 444 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 LINGO3P0C6S8 592 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 SOAT1P35610 550 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 SERPINB5P36952 375 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 P2RX1P51575 399 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 ATP12AP54707 1039 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 ZNF117Q03924 483 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 FOXF1Q12946 379 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 PGS1Q32NB8 556 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 TMEM176BQ3YBM2 270 aaPredicted RBP13.75□□□□□ -0.21
TPM3-219ENST00000509409 KLHL26Q53HC5 615 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 EXOSC6Q5RKV6 272 aaKnown RBP13.75□□□□□ -0.21
TPM3-219ENST00000509409 TMEM201Q5SNT2 666 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 DCST2Q5T1A1 773 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 PLEKHM3Q6ZWE6 761 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 YTHDF3Q7Z739 585 aaKnown RBP13.75□□□□□ -0.21
TPM3-219ENST00000509409 KRTCAP2Q8N6L1 136 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 FBXO27Q8NI29 283 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 MARK4Q96L34 752 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 Q96MF0 132 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 ROPN1BQ9BZX4 212 aaPredicted RBP13.75□□□□□ -0.21
TPM3-219ENST00000509409 ACTR6Q9GZN1 396 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 ANKZF1Q9H8Y5 726 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 ROPN1Q9HAT0 212 aaPredicted RBP13.75□□□□□ -0.21
TPM3-219ENST00000509409 GPR52Q9Y2T5 361 aa13.75□□□□□ -0.21
TPM3-219ENST00000509409 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.74□□□□□ -0.21
TPM3-219ENST00000509409 FAM171A2A8MVW0 826 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 SMAD7O15105 426 aaKnown RBP13.74□□□□□ -0.21
TPM3-219ENST00000509409 KLF4O43474 513 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 OIP5O43482 229 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms