RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 COMMD4Q9H0A8 199 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 NSRP1Q9H0G5 558 aaKnown RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 PTTG2Q9NZH5 202 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 RALYQ9UKM9 306 aaKnown RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 GMPPBQ9Y5P6 360 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 COL4A1P02462 1669 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 A0A0J9YYE9 177 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 SRRM4A7MD48 611 aaKnown RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 HHLA1C9JL84 531 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 OR7A17O14581 309 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 SORBS2O94875 1100 aaKnown RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 CLDN9O95484 217 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 FGFR1OPO95684 399 aaKnown RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 POP4O95707 220 aaKnown RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 TRBC1P01850 177 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 IGHG3P01860 377 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 LYNP07948 512 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 STAG3L3P0CL85 134 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 MCF2P10911 925 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 SLC2A2P11168 524 aaPredicted RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 ZNF12P17014 697 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 MSR1P21757 451 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 SLC1A4P43007 532 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 FNTAP49354 379 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 PSMD7P51665 324 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 FUT6P51993 359 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 HADHBP55084 474 aaKnown RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 CDH11P55287 796 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 YWHAGP61981 247 aaKnown RBP eCLIP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 ACY1Q03154 408 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 FGL1Q08830 312 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 RFTN1Q14699 578 aaPredicted RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 P2RY14Q15391 338 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 SIRPB2Q5JXA9 342 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 SPANXN4Q5MJ08 99 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 DOK6Q6PKX4 331 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 VITQ6UXI7 678 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 KCTD8Q6ZWB6 473 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 TMEM17Q86X19 198 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 VSTM4Q8IW00 320 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 MFSD6LQ8IWD5 586 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 OR4N5Q8IXE1 308 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 ODF3L1Q8IXM7 274 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 IQCF1Q8N6M8 205 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 APOBEC4Q8WW27 367 aaKnown RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 FAM3CQ92520 227 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 RAPGEF5Q92565 580 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 VOPP1Q96AW1 172 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 ADGRG7Q96K78 797 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 LRR1Q96L50 414 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 ANKRD27Q96NW4 1050 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 CCDC3Q9BQI4 270 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 RIOK1Q9BRS2 568 aaKnown RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 SHARPINQ9H0F6 387 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 DNTTIP1Q9H147 329 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 UBE2TQ9NPD8 197 aaPredicted RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 IL26Q9NPH9 171 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 C2orf42Q9NWW7 574 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 FAM120CQ9NX05 1096 aaKnown RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 ZNF639Q9UID6 485 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 RNF115Q9Y4L5 304 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 FKBP7Q9Y680 259 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 RPAP1Q9BWH6 1393 aaPredicted RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 NUP98P52948 1817 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 LRIT2A6NDA9 550 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 HSBP1L1C9JCN9 74 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 CCL24O00175 119 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 CYB561D2O14569 222 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 EI24O14681 340 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 TM9SF1O15321 606 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 CHMP2AO43633 222 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 CYTH3O43739 400 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 IGHEP01854 428 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 ZCCHC18P0CG32 403 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 PRKACAP17612 351 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 HOXA6P31267 233 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 CYLC1P35663 651 aaPredicted RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 MAGEA1P43355 309 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 GYG1P46976 350 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 CRYBB1P53674 252 aaPredicted RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 RWDD2BP57060 319 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 ATXN7L3Q14CW9 347 aaPredicted RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 EXT1Q16394 746 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 C1orf185Q5T7R7 199 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 LRRC66Q68CR7 880 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 ERASQ7Z444 233 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 CEACAM19Q7Z692 300 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 PHC2Q8IXK0 858 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 DNAJC22Q8N4W6 341 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 DHRSXQ8N5I4 330 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 Q8N9G6 341 aaPredicted RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 OR4D5Q8NGN0 318 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 NANPQ8TBE9 248 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 IL1F10Q8WWZ1 152 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 SMPDL3AQ92484 453 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 RPL36ALQ969Q0 106 aaKnown RBP1.95□□□□□ -2.1
PDE4D-218ENST00000509368 LRRC39Q96DD0 335 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 PCED1BQ96HM7 432 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 ELMO2Q96JJ3 720 aa1.95□□□□□ -2.1
PDE4D-218ENST00000509368 AMDHD1Q96NU7 426 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms