RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TPOP07202 933 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 ALOX5P09917 674 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 OR12D1P0DN82 309 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 IDO1P14902 403 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 BMP7P18075 431 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 KLK2P20151 261 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 RPS4Y1P22090 263 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 IL12BP29460 328 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 S100A3P33764 101 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 PTGS2P35354 604 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 LHX2P50458 406 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 ATP4BP51164 291 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 CLNS1AP54105 237 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 CLDN18P56856 261 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 NUP107P57740 925 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 POU6F2P78424 691 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 PRR5P85299 388 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 EFR3AQ14156 821 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 TOMM34Q15785 309 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 GSTA3Q16772 222 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 ACSF3Q4G176 576 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 NHSL2Q5HYW2 709 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 TYW3Q6IPR3 259 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 SLC30A6Q6NXT4 461 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 ADGRE4PQ86SQ3 457 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 GGNQ86UU5 652 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 SLC22A16Q86VW1 577 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 RNF130Q86XS8 419 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 PLCZ1Q86YW0 608 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 LIX1LQ8IVB5 337 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 ULK2Q8IYT8 1036 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 KIRREL3Q8IZU9 778 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 MIER2Q8N344 545 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 RELL2Q8NC24 303 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 FAM71CQ8NEG0 241 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 CEP70Q8NHQ1 597 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 NEIL3Q8TAT5 605 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 GPR151Q8TDV0 419 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 DYDC1Q8WWB3 177 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 JADE3Q92613 823 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 ZG16BQ96DA0 208 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 WDYHV1Q96HA8 205 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 SDF2Q99470 211 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 SLC35A5Q9BS91 424 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 BTBD2Q9BX70 525 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 PRDM14Q9GZV8 571 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 SLC38A1Q9H2H9 487 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 DSN1Q9H410 356 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 ACKR4Q9NPB9 350 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 ATAD3AQ9NVI7 634 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 MED11Q9P086 117 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 ABCG2Q9UNQ0 655 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 L3MBTL1Q9Y468 752 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 LRBAP50851 2863 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 MYO7BQ6PIF6 2116 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 ARHGAP21Q5T5U3 1957 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 ITPR2Q14571 2701 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 HEATR5AQ86XA9 2040 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 CCDC154A6NI56 674 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 ACOT7O00154 380 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 CCL21O00585 134 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 TP53I11O14683 189 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 POLR3GO15318 223 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 CFLARO15519 480 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 EFNA2O43921 213 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 HCN1O60741 890 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 SLC22A3O75751 556 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 RGS9O75916 674 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 SNX4O95219 450 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 TGDSO95455 350 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 NTN1O95631 604 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 ANGPTL1O95841 491 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 EPPINO95925 133 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 ETFAP13804 333 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 ABOP16442 354 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 TBXA2RP21731 343 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 UQCRC2P22695 453 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 SRD5A2P31213 254 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 STARP49675 285 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 POLR2JP52435 117 aaKnown RBP6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 SUCLG1P53597 346 aaKnown RBP6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 CRYBA2P53672 197 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 CLDN20P56880 219 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 CHRNEQ04844 493 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 TFF3Q07654 80 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 FOXF1Q12946 379 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 SKP2Q13309 424 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 SNTA1Q13424 505 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 SQLEQ14534 574 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 SYPL1Q16563 259 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 DECR1Q16698 335 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 DPY19L1Q2PZI1 675 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 CTU2Q2VPK5 515 aaKnown RBP6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 PLPPR5Q32ZL2 321 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 SPDYE7PQ495Y7 208 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 KLHL26Q53HC5 615 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 KRTCAP3Q53RY4 240 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 PDZK1Q5T2W1 519 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 LRIF1Q5T3J3 769 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 VASNQ6EMK4 673 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms