RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 ARSGQ96EG1 525 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 THOC1Q96FV9 657 aaKnown RBP8.47□□□□□ -1.05
DDX41-209ENST00000508279 ZNF845Q96IR2 970 aaPredicted RBP8.47□□□□□ -1.05
DDX41-209ENST00000508279 RNF145Q96MT1 663 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 SDF2Q99470 211 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 ZNF559Q9BR84 538 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 PRRG4Q9BZD6 226 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 HOXD1Q9GZZ0 328 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 INTS9Q9NV88 658 aaKnown RBP8.47□□□□□ -1.05
DDX41-209ENST00000508279 MED17Q9NVC6 651 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 CLCF1Q9UBD9 225 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 STOML1Q9UBI4 398 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 ZNF629Q9UEG4 869 aaPredicted RBP8.47□□□□□ -1.05
DDX41-209ENST00000508279 BTNL2Q9UIR0 455 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 DTNAQ9Y4J8 743 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 DCHS2Q6V1P9 2916 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 TEX15Q9BXT5 2789 aa8.46□□□□□ -1.05
DDX41-209ENST00000508279 ABCA12Q86UK0 2595 aa8.46□□□□□ -1.05
DDX41-209ENST00000508279 A0A087WZY1 265 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 A0A1W2PQD3 144 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 RFXANKO14593 260 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 TNFSF11O14788 317 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 POLR3GO15318 223 aaPredicted RBP8.46□□□□□ -1.06
DDX41-209ENST00000508279 FCMRO60667 390 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 STX11O75558 287 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 SMNDC1O75940 238 aaKnown RBP eCLIP8.46□□□□□ -1.06
DDX41-209ENST00000508279 SOX30O94993 753 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 RCBTB2O95199 551 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 AK1P00568 194 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 H2AFXP16104 143 aaPredicted RBP8.46□□□□□ -1.06
DDX41-209ENST00000508279 ME2P23368 584 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 SFTPDP35247 375 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 P2RX1P51575 399 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 DLX5P56178 289 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 CLDN15P56746 228 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 RPS3AP61247 264 aaKnown RBP8.46□□□□□ -1.06
DDX41-209ENST00000508279 STX1BP61266 288 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 FOXF1Q12946 379 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 PON3Q15166 354 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 BCL2A1Q16548 175 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 GSTA3Q16772 222 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 PLPPR5Q32ZL2 321 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 ARHGAP11BQ3KRB8 267 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 GLYR1Q49A26 553 aaPredicted RBP8.46□□□□□ -1.06
DDX41-209ENST00000508279 PDCD4Q53EL6 469 aaKnown RBP8.46□□□□□ -1.06
DDX41-209ENST00000508279 KLHL26Q53HC5 615 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 SAXO2Q658L1 398 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 CBLN3Q6UW01 205 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 MTERF4Q7Z6M4 381 aaKnown RBP8.46□□□□□ -1.06
DDX41-209ENST00000508279 ZZZ3Q8IYH5 903 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 MIER2Q8N344 545 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 OR9I1Q8NGQ6 314 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 FIG4Q92562 907 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 ROPN1LQ96C74 230 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 NEURL3Q96EH8 262 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 MAELQ96JY0 434 aaKnown RBP8.46□□□□□ -1.06
DDX41-209ENST00000508279 CCDC115Q96NT0 180 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 SH3GL2Q99962 352 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 HHATLQ9HCP6 504 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 WDR45Q9Y484 360 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 AP4B1Q9Y6B7 739 aa8.46□□□□□ -1.06
DDX41-209ENST00000508279 CREBBPQ92793 2442 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 CENPVL1A0A0U1RR11 272 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 SERINC4A6NH21 518 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 LINC01387J3KSC0 135 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 ZNF195O14628 629 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 ZNF264O43296 627 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 AGR2O95994 175 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 CSTAP01040 98 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 IL6P05231 212 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 UBTFL6P0CB48 400 aaPredicted RBP8.45□□□□□ -1.06
DDX41-209ENST00000508279 UBL4AP11441 157 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 ZNF17P17021 662 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 IGFBP2P18065 325 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 IL11P20809 199 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 CPOXP36551 454 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 KIR2DL3P43628 341 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 IDH3AP50213 366 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 POLR2JP52435 117 aaKnown RBP8.45□□□□□ -1.06
DDX41-209ENST00000508279 AQP5P55064 265 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 KRTAP10-9P60411 292 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 TOMM34Q15785 309 aaPredicted RBP8.45□□□□□ -1.06
DDX41-209ENST00000508279 SYPL1Q16563 259 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 TIGD2Q4W5G0 525 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 COX20Q5RI15 118 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 C6orf10Q5SRN2 563 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 FBXW10Q5XX13 1052 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 POMZP3Q6PJE2 187 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 EPGNQ6UW88 154 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 ADGRE4PQ86SQ3 457 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 GTPBP8Q8N3Z3 284 aaPredicted RBP8.45□□□□□ -1.06
DDX41-209ENST00000508279 GLB1L3Q8NCI6 653 aaPredicted RBP8.45□□□□□ -1.06
DDX41-209ENST00000508279 CHDHQ8NE62 594 aaPredicted RBP8.45□□□□□ -1.06
DDX41-209ENST00000508279 FBXO27Q8NI29 283 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 FNDC9Q8TBE3 224 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 RNASE6Q93091 150 aaKnown RBP8.45□□□□□ -1.06
DDX41-209ENST00000508279 VPS33AQ96AX1 596 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 ZBTB8AQ96BR9 441 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 LURAP1Q96LR2 239 aa8.45□□□□□ -1.06
DDX41-209ENST00000508279 C7orf26Q96N11 449 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms