RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 FAF2Q96CS3 445 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 TTC25Q96NG3 672 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 KIR2DL4Q99706 377 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 SLC6A7Q99884 636 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 OMDQ99983 421 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 ERP44Q9BS26 406 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 ALG12Q9BV10 488 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 CRNKL1Q9BZJ0 848 aaKnown RBP3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 TMEM117Q9H0C3 514 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 CAB39LQ9H9S4 337 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 TNFRSF19Q9NS68 423 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 PAK1IP1Q9NWT1 392 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 AIPL1Q9NZN9 384 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 SPRR3Q9UBC9 169 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 GNG12Q9UBI6 72 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 APOBEC3BQ9UH17 382 aaKnown RBP3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 XPO7Q9UIA9 1087 aaKnown RBP3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 MAD1L1Q9Y6D9 718 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 FER1L5A0AVI2 2057 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 HSFX4A0A1B0GTS1 333 aaPredicted RBP3□□□□□ -1.93
HMGB1P28-201ENST00000507778 HSFX3A0A1B0GWH4 333 aaPredicted RBP3□□□□□ -1.93
HMGB1P28-201ENST00000507778 A0A1W2PNV4 684 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 H3BMQ9 156 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 K7ENP7 123 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 OR7A17O14581 309 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 ZNF254O75437 659 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 RPA2P15927 270 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 PGCP20142 388 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 ZP3P21754 424 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 CALB2P22676 271 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 PAX7P23759 505 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 ADORA2BP29275 332 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 UGT1A3P35503 534 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 RPL29P47914 159 aaKnown RBP3□□□□□ -1.93
HMGB1P28-201ENST00000507778 IFNAR2P48551 515 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 STARP49675 285 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 RGS4P49798 205 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 P2RY4P51582 365 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 IGLV3-21P80748 117 aaPredicted RBP3□□□□□ -1.93
HMGB1P28-201ENST00000507778 PRR4Q16378 134 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 SYPL1Q16563 259 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 SLC5A12Q1EHB4 618 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 SBK1Q52WX2 424 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 ACOT1Q86TX2 421 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 CLDN19Q8N6F1 224 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 CTNNBL1Q8WYA6 563 aaPredicted RBP3□□□□□ -1.93
HMGB1P28-201ENST00000507778 SENP8Q96LD8 212 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 CITED1Q99966 193 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 C19orf24Q9BVV8 132 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 ELOVL3Q9HB03 270 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 VNN3Q9NY84 501 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 WRAP73Q9P2S5 460 aaPredicted RBP3□□□□□ -1.93
HMGB1P28-201ENST00000507778 KLHL21Q9UJP4 597 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 CLEC4EQ9ULY5 219 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 MRPS7Q9Y2R9 242 aaKnown RBP3□□□□□ -1.93
HMGB1P28-201ENST00000507778 USP16Q9Y5T5 823 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 ALG6Q9Y672 507 aa3□□□□□ -1.93
HMGB1P28-201ENST00000507778 FRMPD4Q14CM0 1322 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 KLF18A0A0U1RQI7 1052 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 CYSRT1A8MQ03 144 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 NPIPA7E9PJI5 369 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 WWP2O00308 870 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 MSH4O15457 936 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 GMFGO60234 142 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 TPST2O60704 377 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 GPX5O75715 221 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 IGKV3-15P01624 115 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 UGT2B4P06133 528 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 CCDC166P0CW27 439 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 NPIPA8P0DM63 369 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 CPN1P15169 458 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 GCFC2P16383 781 aaKnown RBP2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 KLK2P20151 261 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 PRPHP41219 470 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 AP3M2P53677 418 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 CBX1P83916 185 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 RAB40BQ12829 278 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 TIGITQ495A1 244 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 ANKDD1AQ495B1 522 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 ATAD3BQ5T9A4 648 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 MOB1BQ7L9L4 216 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 C16orf62Q7Z3J2 963 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 ZNF677Q86XU0 584 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 ARL6IP6Q8N6S5 226 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 STXBP6Q8NFX7 210 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 RPL3LQ92901 407 aaKnown RBP2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 SLC25A38Q96DW6 304 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 TRIM44Q96DX7 344 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 C12orf66Q96MD2 445 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 RIT2Q99578 217 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 NANSQ9NR45 359 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 RNF14Q9UBS8 474 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 RIMS3Q9UJD0 308 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 ZNF221Q9UK13 617 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 NPIPA1Q9UND3 350 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 MOKQ9UQ07 419 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 PDE10AQ9Y233 779 aa2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 DDX49Q9Y6V7 483 aaKnown RBP2.99□□□□□ -1.93
HMGB1P28-201ENST00000507778 LOC100131303A0A0U1RQF7 123 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 MBLAC1A4D2B0 266 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms