RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SFXN2Q96NB2 322 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 DPH7Q9BTV6 452 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 IFT27Q9BW83 186 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 LDAHQ9H6V9 325 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 ACSL5Q9ULC5 683 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 GPR55Q9Y2T6 319 aaPredicted RBP16.53■□□□□ 0.24
NUP54-205ENST00000507257 A0A1B0GVC2 190 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 A6NIN4 97 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 NDUFA2O43678 99 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 MTRF1O75570 445 aaKnown RBP16.53■□□□□ 0.24
NUP54-205ENST00000507257 CLEC3AO75596 197 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 PAPLNO95428 1278 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 WNT1P04628 370 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 GPR4P46093 362 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 RAP2BP61225 183 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 ZNF273Q14593 569 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 FAM27D1Q5T7N8 215 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 PLBD1Q6P4A8 553 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 GAREM2Q75VX8 874 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 GDF7Q7Z4P5 450 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 ADIPOR2Q86V24 386 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 DTX3Q8N9I9 347 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 BEST4Q8NFU0 473 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 SLC2A12Q8TD20 617 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 GANCQ8TET4 914 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 SLC41A3Q96GZ6 507 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 SAMD8Q96LT4 415 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 IL17FQ96PD4 163 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 BBS4Q96RK4 519 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 UTP23Q9BRU9 249 aaKnown RBP16.53■□□□□ 0.24
NUP54-205ENST00000507257 WDR26Q9H7D7 661 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 ZMIZ1Q9ULJ6 1067 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 RWDD3Q9Y3V2 267 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 EPXP11678 715 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 PSMB1P20618 241 aaKnown RBP16.52■□□□□ 0.23
NUP54-205ENST00000507257 TBXA2RP21731 343 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 CCR9P51686 369 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 PRR5P85299 388 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 TGM3Q08188 693 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 ACSM3Q53FZ2 586 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 RPL13AP3Q6NVV1 102 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 ZNF547Q8IVP9 402 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 LNX2Q8N448 690 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 EIF4E3Q8N5X7 224 aaKnown RBP16.52■□□□□ 0.23
NUP54-205ENST00000507257 ZBTB44Q8NCP5 570 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 OR11G2Q8NGC1 345 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 LINC00052Q96N35 136 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 DDOQ99489 341 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 ZC4H2Q9NQZ6 224 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 HAO2Q9NYQ3 351 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 IL36AQ9UHA7 158 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 TAC3Q9UHF0 121 aa16.52■□□□□ 0.23
NUP54-205ENST00000507257 A8MUA0 341 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 BHLHE40O14503 412 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 OR2A4O95047 310 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 MT-ND4P03905 459 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 THY1P04216 161 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 CD1AP06126 327 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 CTSLP07711 333 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 AHRP35869 848 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 GDNFP39905 211 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 VASPP50552 380 aaPredicted RBP16.51■□□□□ 0.23
NUP54-205ENST00000507257 MECP2P51608 486 aaKnown RBP16.51■□□□□ 0.23
NUP54-205ENST00000507257 RGS8P57771 180 aaPredicted RBP16.51■□□□□ 0.23
NUP54-205ENST00000507257 AP3S2P59780 193 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 FAM46CQ5VWP2 391 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 CHMP1BQ7LBR1 199 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 OVCH1Q7RTY7 1134 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 VRK2Q86Y07 508 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 VN1R2Q8NFZ6 395 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 OR6M1Q8NGM8 313 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 OR10Z1Q8NGY1 313 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 PCNPQ8WW12 178 aaKnown RBP16.51■□□□□ 0.23
NUP54-205ENST00000507257 PTP4A1Q93096 173 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 DACT3Q96B18 629 aaPredicted RBP16.51■□□□□ 0.23
NUP54-205ENST00000507257 OR2A7Q96R45 310 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 OR7D2Q96RA2 312 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 OR2AG1Q9H205 316 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 PIPOXQ9P0Z9 390 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 PPIEQ9UNP9 301 aaKnown RBP16.51■□□□□ 0.23
NUP54-205ENST00000507257 ASF1AQ9Y294 204 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.51■□□□□ 0.23
NUP54-205ENST00000507257 FAM183AA6NL82 134 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 E9PI62 339 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 EMC8O43402 210 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 POP7O75817 140 aaKnown RBP16.51■□□□□ 0.23
NUP54-205ENST00000507257 ARL6IP5O75915 188 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 TFP02787 698 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 NMBP08949 121 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 ZGLP1P0C6A0 271 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 IFNGR1P15260 489 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 ATF1P18846 271 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 ACTC1P68032 377 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 ACTA1P68133 377 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 CTAG1AP78358 180 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 E2F1Q01094 437 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 RPL6Q02878 288 aaKnown RBP16.51■□□□□ 0.23
NUP54-205ENST00000507257 TUSC1Q2TAM9 212 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 TMEM35AQ53FP2 167 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 UBE2NLQ5JXB2 153 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms