RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 LAMB1P07942 1786 aa2.68□□□□□ -1.98
TRAPPC11-205ENST00000506426 SALL1Q9NSC2 1324 aa2.68□□□□□ -1.98
TRAPPC11-205ENST00000506426 TTC28Q96AY4 2481 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 COL6A3P12111 3177 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 PPIAL4CA0A0B4J2A2 164 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 TRGV8A0A0C4DH27 118 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 GSAPA4D1B5 854 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 LRRC30A6NM36 301 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 PPIAL4DF5H284 164 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 CXCL11O14625 94 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 BCAS1O75363 584 aaPredicted RBP2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 ZNF821O75541 412 aaPredicted RBP2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 PALMO75781 387 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 DUS4LO95620 317 aaKnown RBP2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 ADCY5O95622 1261 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 NUDT14O95848 222 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 IGHG1P01857 330 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 FCGR3AP08637 254 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 PPIAL4GP0DN37 164 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 UCP1P25874 307 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 HOXD10P28358 340 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 PRMT2P55345 433 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 CBX1P83916 185 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 TFDP1Q14186 410 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 EIF2B1Q14232 305 aaKnown RBP2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 SELPLGQ14242 412 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 ZNF146Q15072 292 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 NECTIN1Q15223 517 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 CD226Q15762 336 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 LRRC26Q2I0M4 334 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 LINC01620Q4KN68 170 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 RUSC1-AS1Q66K80 236 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 APOOLQ6UXV4 268 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 TMEM184AQ6ZMB5 413 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 STOX1Q6ZVD7 989 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 TSEN54Q7Z6J9 526 aaKnown RBP2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 LRRTM1Q86UE6 522 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 CCDC71Q8IV32 467 aaPredicted RBP2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 DEFB123Q8N688 67 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 ZNRF1Q8ND25 227 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 ZNF248Q8NDW4 579 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 BEST4Q8NFU0 473 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 ACER1Q8TDN7 264 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 SHC3Q92529 594 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 ART4Q93070 314 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 UPRTQ96BW1 309 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 BIRC7Q96CA5 298 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 ART5Q96L15 291 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 CASD1Q96PB1 797 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 HSD17B14Q9BPX1 270 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 FAM173AQ9BQD7 235 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 RBM4Q9BWF3 364 aaKnown RBP2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 API5Q9BZZ5 524 aaKnown RBP2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 UPF3AQ9H1J1 476 aaKnown RBP2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 RNF41Q9H4P4 317 aaPredicted RBP2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 C11orf49Q9H6J7 331 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 LRRC40Q9H9A6 602 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 IL1RL2Q9HB29 575 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 ZNF580Q9UK33 172 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 ZNF346Q9UL40 294 aaKnown RBP2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 SMC3Q9UQE7 1217 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 MRPS33Q9Y291 106 aaKnown RBP2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 FBXO7Q9Y3I1 522 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 AUP1Q9Y679 476 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 DOCK2Q92608 1830 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 UNC80Q8N2C7 3258 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 A0A0C4DFX4 3053 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 GRIN2DO15399 1336 aa2.67□□□□□ -1.98
TRAPPC11-205ENST00000506426 MBLAC1A4D2B0 266 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 PRR23AA6NEV1 266 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 MFSD2BA6NFX1 497 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 ASB14A6NK59 587 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 K7EQG2 157 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 NTN3O00634 580 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 CASKO14936 926 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 IDH3BO43837 385 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 CNMDO75829 334 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 MT-ND1P03886 318 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 CCDC159P0C7I6 412 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 IQCF3P0C7M6 154 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 TRIM49P0CI25 452 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 TRIM49CP0CI26 452 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 HSD17B1P14061 328 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 RPS2P15880 293 aaKnown RBP2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 H2AFXP16104 143 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 PAX7P23759 505 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 CA8P35219 290 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 RGS4P49798 205 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 EMDP50402 254 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 METAP1P53582 386 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 NDUFV3P56181 108 aaKnown RBP2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 HAND2P61296 217 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 LRRC74AQ0VAA2 488 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 IL24Q13007 206 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 CALCOCO2Q13137 446 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 MAJINQ3KP22 176 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 CYBRD1Q53TN4 286 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 RABGAP1LQ5R372 815 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 BTNL3Q6UXE8 466 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms