RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 SP1P08047 785 aa18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 INPP5JQ15735 1006 aaPredicted RBP18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 FAM98BQ52LJ0 330 aaKnown RBP18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 TBCELQ5QJ74 424 aa18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 LACC1Q8IV20 430 aa18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 MISPQ8IVT2 679 aa18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 FAM71CQ8NEG0 241 aa18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 VANGL1Q8TAA9 524 aaPredicted RBP18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 GEMIN6Q8WXD5 167 aaKnown RBP18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 TM9SF4Q92544 642 aa18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 SH3YL1Q96HL8 342 aaPredicted RBP18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 FRMD6Q96NE9 622 aa18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 ARHGDIGQ99819 225 aa18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 PRORYQ9H606 182 aa18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 KLHL1Q9NR64 748 aa18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 SLC9A8Q9Y2E8 581 aa18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 TNRC6AQ8NDV7 1962 aaKnown RBP18.63■□□□□ 0.57
CDC42SE2-206ENST00000503291 K7EM74 188 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 HCRTR2O43614 444 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 SNX4O95219 450 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 GKN3PP0CG01 181 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 CD46P15529 392 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 CNR1P21554 472 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 CD97P48960 835 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 GPR85P60893 370 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 ZNF117Q03924 483 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 CHRNB3Q05901 458 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 ATMQ13315 3056 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 NRF1Q16656 503 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 SLC25A25Q6KCM7 469 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 CARM1Q86X55 608 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 RBM45Q8IUH3 476 aaKnown RBP18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 ZADH2Q8N4Q0 377 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 OR6T1Q8NGN1 323 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 ARSGQ96EG1 525 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 DEPPQ9NTK1 212 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 CCM2LQ9NUG4 571 aaPredicted RBP18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 SEMG1P04279 462 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 DNASE1L1P49184 302 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 ELF3P78545 371 aaPredicted RBP18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 KCNC4Q03721 635 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 SKP2Q13309 424 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 LINC00303Q3SY05 128 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 PACS2Q86VP3 889 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 SLCO4A1Q96BD0 722 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 LAT2Q9GZY6 243 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 MAGIXQ9H6Y5 334 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 PPP4R1LQ9P1A2 415 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 PCDHGB7Q9Y5F8 929 aa18.62■□□□□ 0.57
CDC42SE2-206ENST00000503291 A0A0G2JMM0 328 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 A0A1W2PPB8 328 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 A0A1W2PRS3 328 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 KIR3DP1A8MWS1 328 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 B4DXG7 233 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 H0YHG0 523 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 GMFGO60234 142 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 EIF4E2O60573 245 aaKnown RBP18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 ADAM11O75078 769 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 PRG2P13727 222 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 RGS8P57771 180 aaPredicted RBP18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 HOXC5Q00444 222 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 WDSUB1Q8N9V3 476 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 PYDC1Q8WXC3 89 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 C7orf34Q96L11 122 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 C5orf34Q96MH7 638 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 AMBRA1Q9C0C7 1298 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 IL1RAPQ9NPH3 570 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 EXOSC3Q9NQT5 275 aaKnown RBP18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 ICAM5Q9UMF0 924 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 RRP15Q9Y3B9 282 aaKnown RBP18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 HRH3Q9Y5N1 445 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 NME2P1O60361 137 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 RAP2AP10114 183 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 NME2P22392 152 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 SLC7A1P30825 629 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 RYKP34925 604 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 ZNF136P52737 540 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 VLDLRP98155 873 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 COL28A1Q2UY09 1125 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 ZNF766Q5HY98 468 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 ZNF550Q7Z398 422 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 GALNTL5Q7Z4T8 443 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 C10orf67Q8IYJ2 551 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 B4GALNT2Q8NHY0 566 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 SLC35B4Q969S0 331 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 DUS3LQ96G46 650 aaKnown RBP18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 ARHGAP9Q9BRR9 750 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 PRR14Q9BWN1 585 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 MED11Q9P086 117 aa18.61■□□□□ 0.57
CDC42SE2-206ENST00000503291 HEATR5AQ86XA9 2040 aa18.6■□□□□ 0.57
CDC42SE2-206ENST00000503291 TPST2O60704 377 aa18.6■□□□□ 0.57
CDC42SE2-206ENST00000503291 MT-ND1P03886 318 aa18.6■□□□□ 0.57
CDC42SE2-206ENST00000503291 IFNW1P05000 195 aa18.6■□□□□ 0.57
CDC42SE2-206ENST00000503291 FAM87AP0C7U9 286 aa18.6■□□□□ 0.57
CDC42SE2-206ENST00000503291 ACAA2P42765 397 aaKnown RBP18.6■□□□□ 0.57
CDC42SE2-206ENST00000503291 MASP1P48740 699 aa18.6■□□□□ 0.57
CDC42SE2-206ENST00000503291 CCR4P51679 360 aa18.6■□□□□ 0.57
CDC42SE2-206ENST00000503291 NPTX1Q15818 432 aa18.6■□□□□ 0.57
CDC42SE2-206ENST00000503291 SULF2Q8IWU5 870 aa18.6■□□□□ 0.57
CDC42SE2-206ENST00000503291 ZNF440Q8IYI8 595 aa18.6■□□□□ 0.57
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