RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 POLR3FQ9H1D9 316 aaPredicted RBP1.53□□□□□ -2.16
SMAD1-203ENST00000502342 VCXQ9H320 206 aa1.53□□□□□ -2.16
SMAD1-203ENST00000502342 NXF3Q9H4D5 531 aaKnown RBP1.53□□□□□ -2.16
SMAD1-203ENST00000502342 ZDHHC11Q9H8X9 412 aa1.53□□□□□ -2.16
SMAD1-203ENST00000502342 LPAR2Q9HBW0 351 aa1.53□□□□□ -2.16
SMAD1-203ENST00000502342 SYTL2Q9HCH5 934 aa1.53□□□□□ -2.16
SMAD1-203ENST00000502342 POLD4Q9HCU8 107 aa1.53□□□□□ -2.16
SMAD1-203ENST00000502342 SH2D2AQ9NP31 389 aa1.53□□□□□ -2.16
SMAD1-203ENST00000502342 DAZ3Q9NR90 486 aaKnown RBP1.53□□□□□ -2.16
SMAD1-203ENST00000502342 CNOT2Q9NZN8 540 aaKnown RBP1.53□□□□□ -2.16
SMAD1-203ENST00000502342 FETUBQ9UGM5 382 aa1.53□□□□□ -2.16
SMAD1-203ENST00000502342 IL20RAQ9UHF4 553 aa1.53□□□□□ -2.16
SMAD1-203ENST00000502342 DCDC2Q9UHG0 476 aa1.53□□□□□ -2.16
SMAD1-203ENST00000502342 CDH10Q9Y6N8 788 aa1.53□□□□□ -2.16
SMAD1-203ENST00000502342 TTC21BQ7Z4L5 1316 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 IGKV2-28A0A075B6P5 120 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 IGHV1OR15-1A0A075B7D0 117 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 SLC9B1P1A6NJY1 282 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 OR6C65A6NJZ3 312 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 GJE1A6NN92 205 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 FAM166BA8MTA8 275 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 WASH3PC4AMC7 463 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 ANKRD63C9JTQ0 380 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 TMX2-CTNND1H3BSU7 103 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 SNAI2O43623 268 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 EFNA2O43921 213 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 ICOSLGO75144 302 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 AKR7A3O95154 331 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 INSP01308 110 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 IGKV2D-28P01615 120 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 IGHV3-48P01763 117 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 MMP1P03956 469 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 IGHV4-34P06331 123 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 HBQ1P09105 142 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 ANXA3P12429 323 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 UQCRBP14927 111 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 ADSSP30520 456 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 SFNP31947 248 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 DLSTP36957 453 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 CTRLP40313 264 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 CSNK1DP48730 415 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 CSNK1G2P78368 415 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 GABPB1Q06547 395 aaPredicted RBP1.52□□□□□ -2.17
SMAD1-203ENST00000502342 UNC119Q13432 240 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 ARFRP1Q13795 201 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 NSDHLQ15738 373 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 KCTD19Q17RG1 926 aaPredicted RBP1.52□□□□□ -2.17
SMAD1-203ENST00000502342 DNAJC21Q5F1R6 531 aaKnown RBP1.52□□□□□ -2.17
SMAD1-203ENST00000502342 ZNF691Q5VV52 312 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 WDR74Q6RFH5 385 aaPredicted RBP1.52□□□□□ -2.17
SMAD1-203ENST00000502342 WASH2PQ6VEQ5 465 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 ARCQ7LC44 396 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 RABEPKQ7Z6M1 372 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 C17orf82Q86X59 251 aaPredicted RBP1.52□□□□□ -2.17
SMAD1-203ENST00000502342 MTURNQ8N3F0 131 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 CERS5Q8N5B7 392 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 FAM71E2Q8N5Q1 922 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 SUMF2Q8NBJ7 301 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 ANKRD20A12PQ8NF67 263 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 OR52I1Q8NGK6 324 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 CNIH3Q8TBE1 160 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 RUFY1Q96T51 708 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 SLC25A51Q9H1U9 297 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 PPDPFQ9H3Y8 114 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 THAP9Q9H5L6 903 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 GPN2Q9H9Y4 310 aaPredicted RBP1.52□□□□□ -2.17
SMAD1-203ENST00000502342 XPO7Q9UIA9 1087 aaKnown RBP1.52□□□□□ -2.17
SMAD1-203ENST00000502342 BTNL2Q9UIR0 455 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 RIMS3Q9UJD0 308 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 SCML2Q9UQR0 700 aa1.52□□□□□ -2.17
SMAD1-203ENST00000502342 CCDC7Q96M83 1385 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 ABCC4O15439 1325 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 ZNFX1Q9P2E3 1918 aaKnown RBP1.51□□□□□ -2.17
SMAD1-203ENST00000502342 LOC100131303A0A0U1RQF7 123 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 TCP11X1B4DZS4 312 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 SSX5O60225 188 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 SNAPINO95295 136 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 CALB2P22676 271 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 COX7A1P24310 79 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 SUCLG1P53597 346 aaKnown RBP1.51□□□□□ -2.17
SMAD1-203ENST00000502342 PFN3P60673 137 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 PRPS1P60891 318 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 HERVK_113P61574 105 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 MAP2K1Q02750 393 aaPredicted RBP1.51□□□□□ -2.17
SMAD1-203ENST00000502342 PDIA5Q14554 519 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 GPNMBQ14956 572 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 PTGES3Q15185 160 aaKnown RBP1.51□□□□□ -2.17
SMAD1-203ENST00000502342 RABGAP1LQ5R372 815 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 LDLRAP1Q5SW96 308 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 C1QTNF12Q5T7M4 302 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 PVRIGQ6DKI7 326 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 RNF165Q6ZSG1 346 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 VRK2Q86Y07 508 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 EFCAB13Q8IY85 973 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 H1FOOQ8IZA3 346 aaPredicted RBP1.51□□□□□ -2.17
SMAD1-203ENST00000502342 ZNF540Q8NDQ6 660 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 NEIL3Q8TAT5 605 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 BLOC1S5Q8TDH9 187 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 FAM151AQ8WW52 585 aa1.51□□□□□ -2.17
SMAD1-203ENST00000502342 OR1E3Q8WZA6 343 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms