RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 PDZK1IP1Q13113 114 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 ARFRP1Q13795 201 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 ATXN7L3Q14CW9 347 aaPredicted RBP2.33□□□□□ -2.04
PSPC1-205ENST00000497722 NDUFA9Q16795 377 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 C2orf83Q53S99 150 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 OR2B11Q5JQS5 317 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 C12orf60Q5U649 245 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 ATL3Q6DD88 541 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 ACSM5Q6NUN0 579 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 TGIF2LYQ8IUE0 185 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 ERI1Q8IV48 349 aaKnown RBP2.33□□□□□ -2.04
PSPC1-205ENST00000497722 RNF175Q8N4F7 328 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 GPATCH11Q8N954 259 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 OR5AU1Q8NGC0 362 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 OR9A4Q8NGU2 314 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 IMMP1LQ96LU5 166 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 IL4I1Q96RQ9 567 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 NXF5Q9H1B4 397 aaKnown RBP2.33□□□□□ -2.04
PSPC1-205ENST00000497722 PPDPFQ9H3Y8 114 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 FARSBQ9NSD9 589 aaKnown RBP2.33□□□□□ -2.04
PSPC1-205ENST00000497722 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.33□□□□□ -2.04
PSPC1-205ENST00000497722 AIPL1Q9NZN9 384 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 SPRR3Q9UBC9 169 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 WDR45Q9Y484 360 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 OARD1Q9Y530 152 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 ALG6Q9Y672 507 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 U3KQV3 271 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 CUX2O14529 1486 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 COL16A1Q07092 1604 aaPredicted RBP2.32□□□□□ -2.04
PSPC1-205ENST00000497722 PPIAL4CA0A0B4J2A2 164 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 A8MUI8 341 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 H3BMQ9 156 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 CLDN5O00501 218 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 RTL8CO15255 209 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 ZNF264O43296 627 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 MMP23AO75900 390 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 LRATO95237 230 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 AK1P00568 194 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 PTMAP06454 111 aaKnown RBP2.32□□□□□ -2.04
PSPC1-205ENST00000497722 PPIAL4GP0DN37 164 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 PRG2P13727 222 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 XRCC1P18887 633 aaPredicted RBP2.32□□□□□ -2.04
PSPC1-205ENST00000497722 ADRA1AP35348 466 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 UGT1A5P35504 534 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 WNT4P56705 351 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 POLR2FP61218 127 aaKnown RBP2.32□□□□□ -2.04
PSPC1-205ENST00000497722 ELAVL3Q14576 367 aaKnown RBP2.32□□□□□ -2.04
PSPC1-205ENST00000497722 PRR4Q16378 134 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 LRRC36Q1X8D7 754 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 USH1GQ495M9 461 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 CFAP221Q4G0U5 840 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 CELF3Q5SZQ8 465 aaKnown RBP2.32□□□□□ -2.04
PSPC1-205ENST00000497722 LIPNQ5VXI9 398 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 ZCCHC12Q6PEW1 402 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 STAC2Q6ZMT1 411 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 ANKRD37Q7Z713 158 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 LHFPL4Q7Z7J7 247 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 ACOT1Q86TX2 421 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 SERPINA9Q86WD7 417 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 CEND1Q8N111 149 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 BBS1Q8NFJ9 593 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 OR2A12Q8NGT7 310 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 ZNF564Q8TBZ8 553 aaPredicted RBP2.32□□□□□ -2.04
PSPC1-205ENST00000497722 M1APQ8TC57 530 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 PNPT1Q8TCS8 783 aaKnown RBP2.32□□□□□ -2.04
PSPC1-205ENST00000497722 AENQ8WTP8 325 aaKnown RBP2.32□□□□□ -2.04
PSPC1-205ENST00000497722 DCUN1D4Q92564 292 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 TAF4BQ92750 862 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 HAVCR1Q96D42 359 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 THUMPD2Q9BTF0 503 aaKnown RBP2.32□□□□□ -2.04
PSPC1-205ENST00000497722 DUSP16Q9BY84 665 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 ECT2Q9H8V3 914 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 ZNF702PQ9H963 129 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 POLE3Q9NRF9 147 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 AGPAT5Q9NUQ2 364 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 MARCH5Q9NX47 278 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 NYAP2Q9P242 653 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 UBQLN1Q9UMX0 589 aaKnown RBP2.32□□□□□ -2.04
PSPC1-205ENST00000497722 CA5BQ9Y2D0 317 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 ATRXP46100 2492 aa2.32□□□□□ -2.04
PSPC1-205ENST00000497722 IGHV7-81A0A0B4J1V7 117 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 HELTA6NFD8 242 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 TUBAL3A6NHL2 446 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 F8WDY8 70 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 KIF2AO00139 706 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-205ENST00000497722 HIP1O00291 1037 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 SDHDO14521 159 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 TPST2O60704 377 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 N4BP1O75113 896 aaKnown RBP2.31□□□□□ -2.04
PSPC1-205ENST00000497722 UGT2B17O75795 530 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 BBOX1O75936 387 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 MFN2O95140 757 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 DIRAS3O95661 229 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 IFNB1P01574 187 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 IGLV1-47P01700 117 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 IGHV3-23P01764 117 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 PDHBP11177 359 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 NCF1P14598 390 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-205ENST00000497722 BDKRB1P46663 353 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 CAV2P51636 162 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms