RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 GSAPA4D1B5 854 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 ZFP92A6NM28 416 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 A8MU10 97 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 OR1F1O43749 312 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 NOL3O60936 208 aaKnown RBP3.42□□□□□ -1.86
VPS36-206ENST00000497149 PEX11AO75192 247 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 UFL1O94874 794 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 F10P00742 488 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 IGHV3-23P01764 117 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 HSPB1P04792 205 aaKnown RBP3.42□□□□□ -1.86
VPS36-206ENST00000497149 EPB41P11171 864 aaKnown RBP3.42□□□□□ -1.86
VPS36-206ENST00000497149 TPSB2P20231 275 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 SERPINA2P20848 420 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 OTUD4Q01804 1114 aaKnown RBP3.42□□□□□ -1.86
VPS36-206ENST00000497149 OC90Q02509 493 aaPredicted RBP3.42□□□□□ -1.86
VPS36-206ENST00000497149 BCL2L1Q07817 233 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 LAGE3Q14657 143 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 TPSAB1Q15661 275 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 CCDC57Q2TAC2 916 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 TIGITQ495A1 244 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 USH1GQ495M9 461 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 RABGAP1LQ5R372 815 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 ACSM5Q6NUN0 579 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 FAHD2BQ6P2I3 314 aaPredicted RBP3.42□□□□□ -1.86
VPS36-206ENST00000497149 FRA10AC1Q70Z53 315 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 VASH2Q86V25 355 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 CEND1Q8N111 149 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 FAHD2AQ96GK7 314 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 OR5B2Q96R09 309 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 DUSP16Q9BY84 665 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 TMOD2Q9NZR1 351 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 IL17CQ9P0M4 197 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 OR1A1Q9P1Q5 309 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 OARD1Q9Y530 152 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 AP1M2Q9Y6Q5 423 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 CLSPNQ9HAW4 1339 aa3.42□□□□□ -1.86
VPS36-206ENST00000497149 LOC100131303A0A0U1RQF7 123 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 B4DXG7 233 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 H3BMQ9 156 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 FCN1O00602 326 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 IDH1O75874 414 aaKnown RBP3.41□□□□□ -1.86
VPS36-206ENST00000497149 GUCA1CO95843 209 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 KRT8P05787 483 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 TSPY4P0CV99 314 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 TSPY10P0CW01 314 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 DNAH10OSP0CZ25 163 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 PSMB1P20618 241 aaKnown RBP3.41□□□□□ -1.86
VPS36-206ENST00000497149 NT5EP21589 574 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 TBXA2RP21731 343 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 DRD5P21918 477 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 HPDP32754 393 aaPredicted RBP3.41□□□□□ -1.86
VPS36-206ENST00000497149 OR3A4PP47883 348 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 EFNA3P52797 238 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 PLA2G16P53816 162 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 DIO3P55073 304 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 LYZP61626 148 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 EWSR1Q01844 656 aaKnown RBP eCLIP3.41□□□□□ -1.86
VPS36-206ENST00000497149 CNTN2Q02246 1040 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 KLHL30Q0D2K2 578 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 WSCD1Q658N2 575 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 BLOC1S2Q6QNY1 142 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 CASC1Q6TDU7 716 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 TFAP2EQ6VUC0 442 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 SH2D6Q7Z4S9 175 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 C17orf82Q86X59 251 aaPredicted RBP3.41□□□□□ -1.86
VPS36-206ENST00000497149 PRR22Q8IZ63 422 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 TEX9Q8N6V9 391 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 C15orf54Q8N8G6 183 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 ZNF564Q8TBZ8 553 aaPredicted RBP3.41□□□□□ -1.86
VPS36-206ENST00000497149 SPRYD4Q8WW59 207 aaPredicted RBP3.41□□□□□ -1.86
VPS36-206ENST00000497149 SYAP1Q96A49 352 aaPredicted RBP3.41□□□□□ -1.86
VPS36-206ENST00000497149 DTNBP1Q96EV8 351 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 B3GALT6Q96L58 329 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 MAGEB18Q96M61 343 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 SLC6A7Q99884 636 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 TEX13BQ9BXU2 312 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 RIBC2Q9H4K1 309 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 EHD1Q9H4M9 534 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 MEAF6Q9HAF1 191 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 PALMDQ9NP74 551 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 FARSBQ9NSD9 589 aaKnown RBP3.41□□□□□ -1.86
VPS36-206ENST00000497149 EPS15L1Q9UBC2 864 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 CHRNA9Q9UGM1 479 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 SH3BGRL2Q9UJC5 107 aa3.41□□□□□ -1.86
VPS36-206ENST00000497149 RAI1Q7Z5J4 1906 aaPredicted RBP3.4□□□□□ -1.86
VPS36-206ENST00000497149 PP2D1A8MPX8 630 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 PPIAL4DF5H284 164 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 LYPLA1O75608 230 aaPredicted RBP3.4□□□□□ -1.87
VPS36-206ENST00000497149 NEBLO76041 1014 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 SEMG1P04279 462 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 PCCBP05166 539 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 HSPA5P11021 654 aaKnown RBP3.4□□□□□ -1.87
VPS36-206ENST00000497149 GCFC2P16383 781 aaKnown RBP3.4□□□□□ -1.87
VPS36-206ENST00000497149 ZNF19P17023 458 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 PGCP20142 388 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 VDAC1P21796 283 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 KIR2DS2P43631 304 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 SLC26A2P50443 739 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 RPS8P62241 208 aaKnown RBP3.4□□□□□ -1.87
VPS36-206ENST00000497149 CSTF1Q05048 431 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms