RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 TBC1D10AQ9BXI6 508 aa1.8□□□□□ -2.12
VPS26A-208ENST00000497022 DDX47Q9H0S4 455 aaKnown RBP1.8□□□□□ -2.12
VPS26A-208ENST00000497022 DBNDD1Q9H9R9 158 aa1.8□□□□□ -2.12
VPS26A-208ENST00000497022 PAK1IP1Q9NWT1 392 aaPredicted RBP1.8□□□□□ -2.12
VPS26A-208ENST00000497022 CWC25Q9NXE8 425 aaPredicted RBP1.8□□□□□ -2.12
VPS26A-208ENST00000497022 HMG20BQ9P0W2 317 aa1.8□□□□□ -2.12
VPS26A-208ENST00000497022 TRIM10Q9UDY6 481 aa1.8□□□□□ -2.12
VPS26A-208ENST00000497022 PRPF19Q9UMS4 504 aaKnown RBP1.8□□□□□ -2.12
VPS26A-208ENST00000497022 EIF3LQ9Y262 564 aaKnown RBP1.8□□□□□ -2.12
VPS26A-208ENST00000497022 MAB21L2Q9Y586 359 aa1.8□□□□□ -2.12
VPS26A-208ENST00000497022 TEX264Q9Y6I9 313 aa1.8□□□□□ -2.12
VPS26A-208ENST00000497022 GPR179Q6PRD1 2367 aa1.8□□□□□ -2.12
VPS26A-208ENST00000497022 SLIT3O75094 1523 aa1.8□□□□□ -2.12
VPS26A-208ENST00000497022 TRBV2A0A0J9YWF9 115 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 BICDL2A1A5D9 508 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 NKX2-6A6NCS4 301 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 E9PMD0 336 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 TMX2-CTNND1H3BSU7 103 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 SGK494L7N484 410 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 NBR2O15453 112 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 NDUFA7O95182 113 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 CSF2P04141 144 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 PCCAP05165 728 aaPredicted RBP1.79□□□□□ -2.12
VPS26A-208ENST00000497022 ABHD2P08910 425 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 BCKDHAP12694 445 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 TSPAN8P19075 237 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 MAGP20916 626 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 PTPN6P29350 595 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 GNPDA1P46926 289 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 CSNK1DP48730 415 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 NOVA1P51513 510 aaKnown RBP1.79□□□□□ -2.12
VPS26A-208ENST00000497022 TFDP1Q14186 410 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 TMEM52BQ4KMG9 183 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 CCDC92Q53HC0 331 aaPredicted RBP1.79□□□□□ -2.12
VPS26A-208ENST00000497022 TSPO2Q5TGU0 170 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 OR8G2PQ6IF36 304 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 WDR74Q6RFH5 385 aaPredicted RBP1.79□□□□□ -2.12
VPS26A-208ENST00000497022 LRRC31Q6UY01 552 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 CYS1Q717R9 158 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 ADAMTSL2Q86TH1 951 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 CNTN4Q8IWV2 1026 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 SPC24Q8NBT2 197 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 ZNF740Q8NDX6 193 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 OR52I1Q8NGK6 324 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 SNX21Q969T3 373 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 SPATA13Q96N96 652 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 RNF126Q9BV68 326 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 RSPO3Q9BXY4 272 aaPredicted RBP1.79□□□□□ -2.12
VPS26A-208ENST00000497022 SRXN1Q9BYN0 137 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 COMMD4Q9H0A8 199 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 CYP39A1Q9NYL5 469 aa1.79□□□□□ -2.12
VPS26A-208ENST00000497022 TDRKHQ9Y2W6 561 aaKnown RBP1.79□□□□□ -2.12
VPS26A-208ENST00000497022 LOC100131303A0A0U1RQF7 123 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 ZNF705EA8MWA4 302 aaPredicted RBP1.78□□□□□ -2.12
VPS26A-208ENST00000497022 DDX39AO00148 427 aaKnown RBP1.78□□□□□ -2.12
VPS26A-208ENST00000497022 ADAM12O43184 909 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 H2AFXP16104 143 aaPredicted RBP1.78□□□□□ -2.12
VPS26A-208ENST00000497022 GCFC2P16383 781 aaKnown RBP1.78□□□□□ -2.12
VPS26A-208ENST00000497022 XRCC1P18887 633 aaPredicted RBP1.78□□□□□ -2.12
VPS26A-208ENST00000497022 ATP6V1E1P36543 226 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 AP1B1Q10567 949 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 ST3GAL3Q11203 375 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 NSDHLQ15738 373 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 C2orf76Q3KRA6 126 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 DNAJC21Q5F1R6 531 aaKnown RBP1.78□□□□□ -2.12
VPS26A-208ENST00000497022 PAGE3Q5JUK9 113 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 UNQ9370/PRO34162Q6UXP9 181 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 C1orf186Q6ZWK4 172 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 ARMCX2Q7L311 632 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 ZSCAN30Q86W11 494 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 ARL10Q8N8L6 244 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 CCDC43Q96MW1 224 aaKnown RBP1.78□□□□□ -2.12
VPS26A-208ENST00000497022 WRAP53Q9BUR4 548 aaKnown RBP1.78□□□□□ -2.12
VPS26A-208ENST00000497022 NFKBIZQ9BYH8 718 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 PPDPFQ9H3Y8 114 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 GPN2Q9H9Y4 310 aaPredicted RBP1.78□□□□□ -2.12
VPS26A-208ENST00000497022 TRPV5Q9NQA5 729 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 STOX2Q9P2F5 926 aaPredicted RBP1.78□□□□□ -2.12
VPS26A-208ENST00000497022 PHF11Q9UIL8 331 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 PLA2G4CQ9UP65 541 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 KNSTRNQ9Y448 316 aa1.78□□□□□ -2.12
VPS26A-208ENST00000497022 GJE1A6NN92 205 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 HCN1O60741 890 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 KINO60870 393 aaKnown RBP1.77□□□□□ -2.13
VPS26A-208ENST00000497022 SNAPINO95295 136 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 HLA-DPA1P20036 260 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 DLSTP36957 453 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 ARF5P84085 180 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 LASP1Q14847 261 aaKnown RBP1.77□□□□□ -2.13
VPS26A-208ENST00000497022 LYPD1Q8N2G4 141 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 ZSCAN4Q8NAM6 433 aaPredicted RBP1.77□□□□□ -2.13
VPS26A-208ENST00000497022 EXOC6Q8TAG9 804 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 KRT35Q92764 455 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 RNF185Q96GF1 192 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 CABS1Q96KC9 395 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 FEM1AQ9BSK4 669 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 ACAT2Q9BWD1 397 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 MAGT1Q9H0U3 335 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 MID1IP1Q9NPA3 183 aa1.77□□□□□ -2.13
VPS26A-208ENST00000497022 BTNL2Q9UIR0 455 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms