RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 IGHA1P01876 353 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 BMP7P18075 431 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 FUT1P19526 365 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 SSTR4P31391 388 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 CTBP2P56545 445 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 RPS25P62851 125 aaKnown RBP12.07□□□□□ -0.48
GARNL3-220ENST00000496711 MAT1AQ00266 395 aaKnown RBP12.07□□□□□ -0.48
GARNL3-220ENST00000496711 RUNX1T1Q06455 604 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 SRSF5Q13243 272 aaKnown RBP12.07□□□□□ -0.48
GARNL3-220ENST00000496711 FAM53BQ14153 422 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 PLK5Q496M5 336 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 COL13A1Q5TAT6 717 aaPredicted RBP12.07□□□□□ -0.48
GARNL3-220ENST00000496711 GARNL3Q5VVW2 1013 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 STEAP3Q658P3 488 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 ZC3H14Q6PJT7 736 aaKnown RBP12.07□□□□□ -0.48
GARNL3-220ENST00000496711 TMPRSS11FQ6ZWK6 438 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 BMP8AQ7Z5Y6 402 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 DEFB119Q8N690 84 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF485Q8NCK3 441 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 PSD4Q8NDX1 1056 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 OR4F15Q8NGB8 312 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 GRHL3Q8TE85 626 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 CNOT9Q92600 299 aaKnown RBP12.07□□□□□ -0.48
GARNL3-220ENST00000496711 BPIFA2Q96DR5 249 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 ABHD8Q96I13 439 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 VSTM2LQ96N03 204 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF285Q96NJ3 590 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 DGAT2Q96PD7 388 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 JAM3Q9BX67 310 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 BARHL1Q9BZE3 327 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 FN3KQ9H479 309 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 SP140LQ9H930 580 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 ATP13A2Q9NQ11 1180 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 SNTG1Q9NSN8 517 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 IRAK4Q9NWZ3 460 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF229Q9UJW7 825 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 PLCL2Q9UPR0 1127 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 PCDHGB6Q9Y5F9 930 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 SPTBP11277 2137 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 KNL1Q8NG31 2342 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 NUP210LQ5VU65 1888 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 IQCMA0A1B0GVH7 501 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 METTL12A8MUP2 240 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 LOC110117498-PIK3R3F6TDL0 507 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 CLDN4O14493 209 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 SOCS6O14544 535 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 CTDSP2O14595 271 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 SLC30A4O14863 429 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 RCBTB2O95199 551 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 IGKV1D-16P01601 117 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 TBXA2RP21731 343 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 GABRA5P31644 462 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 CD79BP40259 229 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 GABRA4P48169 554 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 PPM1FP49593 454 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-220ENST00000496711 QSOX2Q6ZRP7 698 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 CPOQ8IVL8 374 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 KLHL36Q8N4N3 616 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 FAM83FQ8NEG4 500 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-220ENST00000496711 TMEM203Q969S6 136 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 SLC30A2Q9BRI3 323 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 UBE2ZQ9H832 354 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-220ENST00000496711 SOHLH2Q9NX45 425 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 TOR4AQ9NXH8 423 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 DNAJB12Q9NXW2 375 aaKnown RBP12.06□□□□□ -0.48
GARNL3-220ENST00000496711 SF3B6Q9Y3B4 125 aaKnown RBP12.06□□□□□ -0.48
GARNL3-220ENST00000496711 COL5A1P20908 1838 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-220ENST00000496711 TLCD2A6NGC4 264 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 FAM183AA6NL82 134 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 HRKO00198 91 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF749O43361 778 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 CDRT1O95170 752 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 SAGP10523 405 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-220ENST00000496711 GTF2E2P29084 291 aaKnown RBP12.06□□□□□ -0.48
GARNL3-220ENST00000496711 CD97P48960 835 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 COPZ1P61923 177 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 CDC20Q12834 499 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF267Q14586 743 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-220ENST00000496711 AGAP7PQ5VUJ5 663 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 C22orf42Q6IC83 251 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 NIPAL3Q6P499 406 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 PLBD1Q6P4A8 553 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 NPSR1Q6W5P4 371 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 LHFPL3Q86UP9 236 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 LSRQ86X29 649 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-220ENST00000496711 LNX2Q8N448 690 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 SIRT6Q8N6T7 355 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 OR4N2Q8NGD1 307 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 OR13C2Q8NGS9 318 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 OR52N1Q8NH53 320 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 SLC35B4Q969S0 331 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 SLC25A46Q96AG3 418 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 KCTD7Q96MP8 289 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 TRIM2Q9C040 744 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 PCED1AQ9H1Q7 454 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 CHRDQ9H2X0 955 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 CPNE5Q9HCH3 593 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 Q9N2J8 555 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-220ENST00000496711 ERVK13-1Q9NX77 482 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms