RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ANKRD28O15084 1053 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 GMFGO60234 142 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 SCN2BO60939 215 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 GUSBP08236 651 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 LINGO3P0C6S8 592 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 ELK4P28324 431 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 SOAT1P35610 550 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 FAM214BQ7L5A3 538 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 CDC20BQ86Y33 519 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 CNEP1R1Q8N9A8 125 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 OR5AK3PQ8NH89 298 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 SMPDL3BQ92485 455 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 SH3YL1Q96HL8 342 aaPredicted RBP21.77■■□□□ 1.08
HLA-C-209ENST00000495835 ZNF845Q96IR2 970 aaPredicted RBP21.77■■□□□ 1.08
HLA-C-209ENST00000495835 ADGRG7Q96K78 797 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 PAIP2Q9BPZ3 127 aaKnown RBP21.77■■□□□ 1.08
HLA-C-209ENST00000495835 SLC39A3Q9BRY0 314 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 GLRX2Q9NS18 164 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 THAP1Q9NVV9 213 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 ST6GALNAC2Q9UJ37 374 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 MCTS1Q9ULC4 181 aaKnown RBP21.77■■□□□ 1.08
HLA-C-209ENST00000495835 ICAM5Q9UMF0 924 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 KCNE3Q9Y6H6 103 aa21.77■■□□□ 1.08
HLA-C-209ENST00000495835 SH3D21A4FU49 640 aa21.76■■□□□ 1.07
HLA-C-209ENST00000495835 EIF4E2O60573 245 aaKnown RBP21.76■■□□□ 1.07
HLA-C-209ENST00000495835 CGAP01215 116 aa21.76■■□□□ 1.07
HLA-C-209ENST00000495835 UQCRC2P22695 453 aa21.76■■□□□ 1.07
HLA-C-209ENST00000495835 ZNF117Q03924 483 aa21.76■■□□□ 1.07
HLA-C-209ENST00000495835 VWA1Q6PCB0 445 aa21.76■■□□□ 1.07
HLA-C-209ENST00000495835 BTLAQ7Z6A9 289 aa21.76■■□□□ 1.07
HLA-C-209ENST00000495835 CLECL1Q8IZS7 167 aa21.76■■□□□ 1.07
HLA-C-209ENST00000495835 RNF145Q96MT1 663 aa21.76■■□□□ 1.07
HLA-C-209ENST00000495835 PRRG4Q9BZD6 226 aa21.76■■□□□ 1.07
HLA-C-209ENST00000495835 EXD2Q9NVH0 621 aa21.76■■□□□ 1.07
HLA-C-209ENST00000495835 PNPOQ9NVS9 261 aa21.76■■□□□ 1.07
HLA-C-209ENST00000495835 GPC6Q9Y625 555 aaPredicted RBP21.76■■□□□ 1.07
HLA-C-209ENST00000495835 F8P00451 2351 aa21.76■■□□□ 1.07
HLA-C-209ENST00000495835 TMEM120BA0PK00 339 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 SHISA8B8ZZ34 492 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 SLCO1B7G3V0H7 640 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 GTPBP1O00178 669 aaKnown RBP21.75■■□□□ 1.07
HLA-C-209ENST00000495835 CASKO14936 926 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 STX11O75558 287 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 SMNDC1O75940 238 aaKnown RBP eCLIP21.75■■□□□ 1.07
HLA-C-209ENST00000495835 IL11P20809 199 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 CD79BP40259 229 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 EIF1AXP47813 144 aaKnown RBP21.75■■□□□ 1.07
HLA-C-209ENST00000495835 WDR4P57081 412 aaKnown RBP21.75■■□□□ 1.07
HLA-C-209ENST00000495835 LRRC74AQ0VAA2 488 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 CASP8Q14790 479 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 CTU2Q2VPK5 515 aaKnown RBP21.75■■□□□ 1.07
HLA-C-209ENST00000495835 ARHGAP11BQ3KRB8 267 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 ATG16L1Q676U5 607 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 GTF2IRD2BQ6EKJ0 949 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 SPATA19Q7Z5L4 167 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 GTF2IRD2Q86UP8 949 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 TOR1AIP2Q8NFQ8 470 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 OR4A15Q8NGL6 344 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 OR10D3Q8NH80 312 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 POC1BQ8TC44 478 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 GMPPAQ96IJ6 420 aaPredicted RBP21.75■■□□□ 1.07
HLA-C-209ENST00000495835 SLC35G5Q96KT7 338 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 FOXC2Q99958 501 aa21.75■■□□□ 1.07
HLA-C-209ENST00000495835 TEP1Q99973 2627 aaKnown RBP21.75■■□□□ 1.07
HLA-C-209ENST00000495835 RNF103-CHMP3A0A140T963 221 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 TRPC5OSA6NMA1 111 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 GJE1A6NN92 205 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 HDAC3O15379 428 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 SNNO75324 88 aaPredicted RBP21.74■■□□□ 1.07
HLA-C-209ENST00000495835 IST1P53990 364 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.74■■□□□ 1.07
HLA-C-209ENST00000495835 FBXW10Q5XX13 1052 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 ANKRD42Q8N9B4 389 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 OR5D16Q8NGK9 328 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 OR2V1Q8NHB1 315 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 ARSGQ96EG1 525 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 CXXC4Q9H2H0 198 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 POLE3Q9NRF9 147 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 PLSCR4Q9NRQ2 329 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 CARD8Q9Y2G2 431 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 EMC9Q9Y3B6 208 aa21.74■■□□□ 1.07
HLA-C-209ENST00000495835 E9PBE3 544 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 ZNF264O43296 627 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 AQP8O94778 261 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 SYNGR4O95473 234 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 PABPC4LP0CB38 370 aaKnown RBP21.73■■□□□ 1.07
HLA-C-209ENST00000495835 ART1P52961 327 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 TXNL4AP83876 142 aaKnown RBP21.73■■□□□ 1.07
HLA-C-209ENST00000495835 ZNF141Q15928 474 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 SLC25A53Q5H9E4 307 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 HEPHL1Q6MZM0 1159 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 ZNF474Q6S9Z5 364 aaPredicted RBP21.73■■□□□ 1.07
HLA-C-209ENST00000495835 CBLN3Q6UW01 205 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 LILRA2Q8N149 483 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 OR6K3Q8NGY3 331 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 GPR119Q8TDV5 335 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 MRGPRX4Q96LA9 322 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 KLHL15Q96M94 604 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 TIGARQ9NQ88 270 aa21.73■■□□□ 1.07
HLA-C-209ENST00000495835 BTNL2Q9UIR0 455 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms