RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 GTPBP8Q8N3Z3 284 aaPredicted RBP12.97□□□□□ -0.33
SCAP-213ENST00000494938 C9orf106Q8NAJ2 232 aa12.97□□□□□ -0.33
SCAP-213ENST00000494938 MBD3L2Q8NHZ7 208 aaPredicted RBP12.97□□□□□ -0.33
SCAP-213ENST00000494938 ITCHQ96J02 903 aa12.97□□□□□ -0.33
SCAP-213ENST00000494938 PAIP1Q9H074 479 aaKnown RBP12.97□□□□□ -0.33
SCAP-213ENST00000494938 KCNJ16Q9NPI9 418 aa12.97□□□□□ -0.33
SCAP-213ENST00000494938 NPDC1Q9NQX5 325 aaPredicted RBP12.97□□□□□ -0.33
SCAP-213ENST00000494938 DCTN4Q9UJW0 460 aa12.97□□□□□ -0.33
SCAP-213ENST00000494938 VDAC3Q9Y277 283 aa12.97□□□□□ -0.33
SCAP-213ENST00000494938 AP4B1Q9Y6B7 739 aa12.97□□□□□ -0.33
SCAP-213ENST00000494938 NOTCH2Q04721 2471 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 C7orf72A4D263 438 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 FAM90A27PA6NNH2 459 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 CLCA1A8K7I4 914 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 H0Y3Z8 333 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 H3BNH8 94 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 GTPBP1O00178 669 aaKnown RBP12.96□□□□□ -0.33
SCAP-213ENST00000494938 EFNA2O43921 213 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 KIAA0513O60268 411 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 TNFRSF21O75509 655 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 KRT75O95678 551 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 HOXB9P17482 250 aaPredicted RBP12.96□□□□□ -0.33
SCAP-213ENST00000494938 POU3F2P20265 443 aaPredicted RBP12.96□□□□□ -0.33
SCAP-213ENST00000494938 ZNF136P52737 540 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 CLDN20P56880 219 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 STX1BP61266 288 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 TXNL4AP83876 142 aaKnown RBP12.96□□□□□ -0.33
SCAP-213ENST00000494938 CHRNEQ04844 493 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 RCAN2Q14206 197 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 TOMM34Q15785 309 aaPredicted RBP12.96□□□□□ -0.33
SCAP-213ENST00000494938 FRRS1Q6ZNA5 592 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 ANKFN1Q8N957 763 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 PNPT1Q8TCS8 783 aaKnown RBP12.96□□□□□ -0.33
SCAP-213ENST00000494938 GPR119Q8TDV5 335 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 WNT2BQ93097 391 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 TRNT1Q96Q11 434 aaKnown RBP12.96□□□□□ -0.33
SCAP-213ENST00000494938 TREX2Q9BQ50 279 aaPredicted RBP12.96□□□□□ -0.33
SCAP-213ENST00000494938 ZNF385DQ9H6B1 395 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 RMND5AQ9H871 391 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 NPHS2Q9NP85 383 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 POLE3Q9NRF9 147 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 TMEM45AQ9NWC5 275 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 CCDC167Q9P0B6 97 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 CLCF1Q9UBD9 225 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 WDR45Q9Y484 360 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 PCDHB14Q9Y5E9 798 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 DCHS2Q6V1P9 2916 aa12.96□□□□□ -0.33
SCAP-213ENST00000494938 NUP214P35658 2090 aaPredicted RBP12.95□□□□□ -0.34
SCAP-213ENST00000494938 FBN2P35556 2912 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 HNRNPRO43390 633 aaKnown RBP12.95□□□□□ -0.34
SCAP-213ENST00000494938 ATP8B1O43520 1251 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 EIF4E2O60573 245 aaKnown RBP12.95□□□□□ -0.34
SCAP-213ENST00000494938 DNAJA2O60884 412 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 BCAS1O75363 584 aaPredicted RBP12.95□□□□□ -0.34
SCAP-213ENST00000494938 RCBTB2O95199 551 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 H6PDO95479 791 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 TGM6O95932 706 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 IL2RAP01589 272 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 CHRM4P08173 479 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 ETFAP13804 333 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 PRF1P14222 555 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 ZNF17P17021 662 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 IGFBP2P18065 325 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 IL11P20809 199 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 MAGEA8P43361 318 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 P2RX1P51575 399 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 IRX1P78414 480 aaPredicted RBP12.95□□□□□ -0.34
SCAP-213ENST00000494938 AGKQ53H12 422 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 PAGE3Q5JUK9 113 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 DNAJC14Q6Y2X3 702 aaPredicted RBP12.95□□□□□ -0.34
SCAP-213ENST00000494938 MARVELD3Q96A59 401 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 ZBTB8AQ96BR9 441 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 ARSGQ96EG1 525 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 AURKBQ96GD4 344 aaPredicted RBP12.95□□□□□ -0.34
SCAP-213ENST00000494938 SPOCK3Q9BQ16 436 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 LAT2Q9GZY6 243 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 ENKD1Q9H0I2 346 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 SLC38A1Q9H2H9 487 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 TPT1P8Q9HAU6 139 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 SLAMF8Q9P0V8 285 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 ZNF629Q9UEG4 869 aaPredicted RBP12.95□□□□□ -0.34
SCAP-213ENST00000494938 LIPT1Q9Y234 373 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 MED12Q93074 2177 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 TEX15Q9BXT5 2789 aa12.95□□□□□ -0.34
SCAP-213ENST00000494938 A0A096LPI6 279 aa12.94□□□□□ -0.34
SCAP-213ENST00000494938 H3BML4 177 aa12.94□□□□□ -0.34
SCAP-213ENST00000494938 ZNF264O43296 627 aa12.94□□□□□ -0.34
SCAP-213ENST00000494938 NTN1O95631 604 aa12.94□□□□□ -0.34
SCAP-213ENST00000494938 OPN1LWP04000 364 aa12.94□□□□□ -0.34
SCAP-213ENST00000494938 TFPTP0C1Z6 253 aa12.94□□□□□ -0.34
SCAP-213ENST00000494938 NCF2P19878 526 aaPredicted RBP12.94□□□□□ -0.34
SCAP-213ENST00000494938 CAPN3P20807 821 aa12.94□□□□□ -0.34
SCAP-213ENST00000494938 CTSSP25774 331 aa12.94□□□□□ -0.34
SCAP-213ENST00000494938 PGM1P36871 562 aa12.94□□□□□ -0.34
SCAP-213ENST00000494938 AGFG1P52594 562 aaKnown RBP12.94□□□□□ -0.34
SCAP-213ENST00000494938 RAC1P63000 192 aa12.94□□□□□ -0.34
SCAP-213ENST00000494938 GUCY1A3Q02108 690 aa12.94□□□□□ -0.34
SCAP-213ENST00000494938 FOXF2Q12947 444 aa12.94□□□□□ -0.34
SCAP-213ENST00000494938 SKP2Q13309 424 aa12.94□□□□□ -0.34
SCAP-213ENST00000494938 SQLEQ14534 574 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms