RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 Q6ZTC4 211 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 CCDC80Q76M96 950 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 SLC47A2Q86VL8 602 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 LRRC75A-AS1Q8N1F1 130 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 C15orf54Q8N8G6 183 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 OR10A7Q8NGE5 316 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 OR4D5Q8NGN0 318 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 OR6T1Q8NGN1 323 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 OR8J1Q8NGP2 316 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 ITLN1Q8WWA0 313 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 IL1F10Q8WWZ1 152 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 TUBGCP3Q96CW5 907 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 FAHD2AQ96GK7 314 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 TMEM80Q96HE8 168 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 ZNF599Q96NL3 588 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 RBM4BQ9BQ04 359 aaKnown RBP4.87□□□□□ -1.63
SMC2-205ENST00000493955 NXF5Q9H1B4 397 aaKnown RBP4.87□□□□□ -1.63
SMC2-205ENST00000493955 PNNQ9H307 717 aaKnown RBP4.87□□□□□ -1.63
SMC2-205ENST00000493955 IMPAD1Q9NX62 359 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 LCMT1Q9UIC8 334 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 ZNF221Q9UK13 617 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 NAALAD2Q9Y3Q0 740 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 STYXL1Q9Y6J8 313 aa4.87□□□□□ -1.63
SMC2-205ENST00000493955 MAGI1Q96QZ7 1491 aaPredicted RBP4.86□□□□□ -1.63
SMC2-205ENST00000493955 PCNX3Q9H6A9 2034 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 SAGE2PA6NJ88 616 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 PCP4L1A6NKN8 68 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 CCDC169A6NNP5 214 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 G3V4G9 280 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 SRPX2O60687 465 aaPredicted RBP4.86□□□□□ -1.63
SMC2-205ENST00000493955 LRATO95237 230 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 UMPSP11172 480 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 PCMT1P22061 227 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 RAB40BQ12829 278 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 ZNF154Q13106 437 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 CEP85LQ5SZL2 805 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 FAM120AOSQ5T036 256 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 ZNF57Q68EA5 555 aaPredicted RBP4.86□□□□□ -1.63
SMC2-205ENST00000493955 ZNF343Q6P1L6 599 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 GPRIN3Q6ZVF9 776 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 NLRP9Q7RTR0 991 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 ZNF440Q8IYI8 595 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 DHRSXQ8N5I4 330 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 C17orf47Q8NEP4 570 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 OR5L2Q8NGL0 311 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 OR5D13Q8NGL4 314 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 OR1F12Q8NHA8 337 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 VGLL1Q99990 258 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 TM2D1Q9BX74 207 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 TRIM15Q9C019 465 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 OPN3Q9H1Y3 402 aaPredicted RBP4.86□□□□□ -1.63
SMC2-205ENST00000493955 FN3KRPQ9HA64 309 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 GNB4Q9HAV0 340 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 ARMCX1Q9P291 453 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 GAPVD1Q14C86 1478 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 CNTNAP2Q9UHC6 1331 aa4.86□□□□□ -1.63
SMC2-205ENST00000493955 SHROOM2Q13796 1616 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 A0A1W2PPR1 153 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 ZNF840PA6NDX5 716 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 SH3BGRLO75368 114 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 HOXD4P09016 255 aaPredicted RBP4.85□□□□□ -1.63
SMC2-205ENST00000493955 PNMTP11086 282 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 IDSP22304 550 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 MT3P25713 68 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 DPYSL3Q14195 570 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 LAGE3Q14657 143 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 LTB4RQ15722 352 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 NDUFA9Q16795 377 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 MRGPRG-AS1Q2M3A8 158 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 C14orf177Q52M58 125 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 SLC25A42Q86VD7 318 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 OR2T33Q8NG76 320 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 OR9A4Q8NGU2 314 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 ADAMTS16Q8TE57 1224 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 NR4A3Q92570 626 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 ZBED6CLQ96FA7 236 aaPredicted RBP4.85□□□□□ -1.63
SMC2-205ENST00000493955 TUBGCP2Q9BSJ2 902 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 SLC17A5Q9NRA2 495 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 SLC2A6Q9UGQ3 507 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 CDH9Q9ULB4 789 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 RASD1Q9Y272 281 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 GRIN2BQ13224 1484 aa4.85□□□□□ -1.63
SMC2-205ENST00000493955 ACOD1A6NK06 481 aa4.84□□□□□ -1.63
SMC2-205ENST00000493955 E9PQ18 207 aa4.84□□□□□ -1.63
SMC2-205ENST00000493955 G3V3Y1 287 aa4.84□□□□□ -1.63
SMC2-205ENST00000493955 TAPBPO15533 448 aa4.84□□□□□ -1.63
SMC2-205ENST00000493955 KBTBD11O94819 623 aa4.84□□□□□ -1.63
SMC2-205ENST00000493955 CD55P08174 381 aa4.84□□□□□ -1.63
SMC2-205ENST00000493955 HMGCS2P54868 508 aa4.84□□□□□ -1.63
SMC2-205ENST00000493955 CCBE1Q6UXH8 406 aaPredicted RBP4.84□□□□□ -1.63
SMC2-205ENST00000493955 CDH26Q8IXH8 852 aa4.84□□□□□ -1.63
SMC2-205ENST00000493955 Q8N9G6 341 aaPredicted RBP4.84□□□□□ -1.63
SMC2-205ENST00000493955 TFB1MQ8WVM0 346 aaKnown RBP4.84□□□□□ -1.63
SMC2-205ENST00000493955 FBXO32Q969P5 355 aa4.84□□□□□ -1.63
SMC2-205ENST00000493955 OR5B2Q96R09 309 aa4.84□□□□□ -1.63
SMC2-205ENST00000493955 MCCC1Q96RQ3 725 aaPredicted RBP4.84□□□□□ -1.63
SMC2-205ENST00000493955 KRTAP1-5Q9BYS1 174 aa4.84□□□□□ -1.63
SMC2-205ENST00000493955 HYPKQ9NX55 129 aa4.84□□□□□ -1.63
SMC2-205ENST00000493955 RALGAPA1Q6GYQ0 2036 aa4.84□□□□□ -1.63
SMC2-205ENST00000493955 EFCAB7A8K855 629 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms