RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 LIPT1Q9Y234 373 aa6.31□□□□□ -1.4
TOP3A-207ENST00000493648 VDAC3Q9Y277 283 aa6.31□□□□□ -1.4
TOP3A-207ENST00000493648 UTP20O75691 2785 aaKnown RBP6.31□□□□□ -1.4
TOP3A-207ENST00000493648 SPTAN1Q13813 2472 aaKnown RBP6.31□□□□□ -1.4
TOP3A-207ENST00000493648 HCFC1P51610 2035 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 CACNA1DQ01668 2161 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 SETXQ7Z333 2677 aaKnown RBP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 NPIPA5A0A0B4J1W7 369 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 C7orf72A4D263 438 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 SERINC4A6NH21 518 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 CYSRT1A8MQ03 144 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 NPIPA7E9PJI5 369 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 NPIPB9F8W1W9 429 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 SYT5O00445 386 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 HMGN4O00479 90 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 SEC14L5O43304 696 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 TNFRSF21O75509 655 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 UGT2B17O75795 530 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 CYP7B1O75881 506 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 RCBTB2O95199 551 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 IL18BPO95998 194 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 CSTAP01040 98 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 SNRPB2P08579 225 aaKnown RBP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 NPIPA8P0DM63 369 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 TMIGD3P0DMS9 266 aaPredicted RBP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 UBL4AP11441 157 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 NCF2P19878 526 aaPredicted RBP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 BMP5P22003 454 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 ME2P23368 584 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 ADH6P28332 368 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 PEX19P40855 299 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 CRATP43155 626 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 SUMO3P55854 103 aaPredicted RBP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 RAC1P63000 192 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 ZNF117Q03924 483 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 CBFBQ13951 182 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 CD226Q15762 336 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 TMEM44Q2T9K0 475 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 C6orf10Q5SRN2 563 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 PDSS1Q5T2R2 415 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 PDZK1Q5T2W1 519 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 AP1ARQ63HQ0 302 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 OR2A2Q6IF42 318 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 TYW3Q6IPR3 259 aaKnown RBP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 MEX3BQ6ZN04 569 aaKnown RBP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 EIF3MQ7L2H7 374 aaKnown RBP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 ADGRE4PQ86SQ3 457 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 GRAMD2AQ8IUY3 354 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 MCEMP1Q8IX19 187 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 ZNF619Q8N2I2 560 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 GTPBP8Q8N3Z3 284 aaPredicted RBP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 C9orf106Q8NAJ2 232 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 OR9I1Q8NGQ6 314 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 OR5W2Q8NH69 310 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 RFWD2Q8NHY2 731 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 ZFP90Q8TF47 636 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 STON2Q8WXE9 905 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 PMM1Q92871 262 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 VPS33AQ96AX1 596 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 TRNT1Q96Q11 434 aaKnown RBP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 PRRG4Q9BZD6 226 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 ZNF350Q9GZX5 532 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 LAT2Q9GZY6 243 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 SAP130Q9H0E3 1048 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 ENKD1Q9H0I2 346 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 RAD21L1Q9H4I0 556 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 MTHFD2LQ9H903 347 aaPredicted RBP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 MED17Q9NVC6 651 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 PAQR5Q9NXK6 330 aaPredicted RBP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 CCDC167Q9P0B6 97 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 ICAM5Q9UMF0 924 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 TRIM33Q9UPN9 1127 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 CARD8Q9Y2G2 431 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 WDR45Q9Y484 360 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 GPC6Q9Y625 555 aaPredicted RBP6.3□□□□□ -1.4
TOP3A-207ENST00000493648 CACNA1CQ13936 2221 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 MED12Q93074 2177 aa6.3□□□□□ -1.4
TOP3A-207ENST00000493648 TMEM247A6NEH6 219 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 SLC22A20A6NK97 555 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 GJE1A6NN92 205 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 KDM4EB2RXH2 506 aaPredicted RBP6.29□□□□□ -1.4
TOP3A-207ENST00000493648 SHISA8B8ZZ34 492 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 EIF1AYO14602 144 aaKnown RBP6.29□□□□□ -1.4
TOP3A-207ENST00000493648 ATP8B1O43520 1251 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 EDF1O60869 148 aaKnown RBP6.29□□□□□ -1.4
TOP3A-207ENST00000493648 SYNGR4O95473 234 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 H6PDO95479 791 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 CRHP06850 196 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 LINGO3P0C6S8 592 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 NR2F1P10589 423 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 PGCP20142 388 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 ASCL1P50553 236 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 RNF144AP50876 292 aaPredicted RBP6.29□□□□□ -1.4
TOP3A-207ENST00000493648 ATP4BP51164 291 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 CCR4P51679 360 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 AGFG1P52594 562 aaKnown RBP6.29□□□□□ -1.4
TOP3A-207ENST00000493648 ZNF136P52737 540 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 SUCLG1P53597 346 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms